KEGG   Rhodococcus sp. DN22: RA302_13165
Entry
RA302_13165       CDS       T09949                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rhoo  Rhodococcus sp. DN22
Pathway
rhoo00300  Lysine biosynthesis
rhoo00470  D-Amino acid metabolism
rhoo01100  Metabolic pathways
rhoo01110  Biosynthesis of secondary metabolites
rhoo01120  Microbial metabolism in diverse environments
rhoo01230  Biosynthesis of amino acids
Module
rhoo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhoo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RA302_13165 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RA302_13165 (dapF)
Enzymes [BR:rhoo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RA302_13165 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CusF_Ec
Other DBs
NCBI-ProteinID: WVX73109
LinkDB
Position
2857141..2858010
AA seq 289 aa
MDFSKGHGTQNDFVVLPDLDVRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL
GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV
VVHGYDATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEVLSA
LDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAALKF
DGRDEGSVLVRVRGGEVQVTVEGGEGSLRGPSVLVANGTISDAWWQSLV
NT seq 870 nt   +upstreamnt  +downstreamnt
atggatttcagtaagggccacggcacgcagaacgacttcgttgttctccctgacctcgac
gttcgggtcgatctcgagccggcgcgagtttcagcgttgtgtgatcgtcagcgtggcctc
ggcgccgacggcatccttcgtgtcgcccgggcaggcgcacttgcggacgcgggcgtgctc
ggtgcgctgcccgacggcgtcgctgccgaagactggttcatggactaccgcaacagcgac
ggctccatcgcggagatgtgcggaaacggagttcgcgtattcgcccactatctcaaggcc
tcgggcttggagagcaaggacgagttcgtggtcggcagtcgtgccggagcgcgtccggtc
gtggtgcacggctacgacgccacacatggtgacgtgaccgtggcgatgggcccgatcaag
gacctcggcaccagttcggcaacaatcgacggccgcgtcttcgccggcgtcggcatcgac
gtcggtaatccgcatttggcgtgtgtcgacgagcacgtgacggcagaagttttgagtgcg
ctcgatttgagtgtttctccgggcttcgatccggggttcttcccgcacggggtcaacatc
gagatcgtgacgccgatccacgacggtggggtccacatgcgcgtacacgagcgtggtgtg
ggcgagactcgttcctgcggaaccggaacggtcgcagctgcggccgcggcgctgaagttc
gacggccgagacgaaggctcggtgctggtgcgcgtgcgcggcggcgaagtgcaggtcacc
gtcgaaggcggcgaagggtcgttgcgggggccctcggttctggtggcgaacgggacgatc
agcgatgcctggtggcaatcgctcgtgtga

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