Rhodococcus sp. DN22: RA302_13720
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Entry
RA302_13720 CDS
T09949
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00750
Vitamin B6 metabolism
rhoo01100
Metabolic pathways
rhoo01240
Biosynthesis of cofactors
Module
rhoo_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RA302_13720 (pdxS)
Enzymes [BR:
rhoo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RA302_13720 (pdxS)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
TetR_C_27
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
WVX73209
LinkDB
All DBs
Position
2972028..2972936
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AA seq
302 aa
AA seq
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MSTPDSAPTTAIGTARVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPADI
RAQGGVSRMSDPDMIDSIISTVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADY
ANHIDKWKFTAPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRTIRGEIR
RLTSLSEDELYVAAKELQAPYELVVEVAKAGKLPVTMFTAGGIATPADAAMMMQLGAEGV
FVGSGIFKSGNPKQRAEAIVKATTFYDDPDVLAKVSRGLGEAMVGINVDDLPVGHRLAER
GW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccccgactctgcccccaccaccgccatcggcaccgcccgcgtcaagcgcggc
atggctgaaatgctcaagggcggtgtgatcatggacgtggtcaccgctgagcaggccaag
atcgccgaagacgcaggcgccgtcgccgtcatggcactcgagcgggtccccgcagacatt
cgcgcacagggcggcgtctcgcgcatgagtgacccggacatgatcgacagcatcatctcc
accgtcagcatccccgtcatggcgaaggcacgcatcggtcacttcgtcgaagcgcagatc
ctgcagagcctcggcgtcgactacatcgacgagtccgaggtcctgaccccggccgactac
gccaaccacatcgacaagtggaagttcaccgctcccttcgtgtgtggcgccaccaacctc
ggtgaagcactccgtcgcatcaacgaaggcgcggccatgatccgctcgaagggtgaagcc
ggcaccggagacgtctccaacgccaccacacacatgcgcaccatccgcggcgagatccgc
cggttgacctcgctgagcgaggacgaactgtacgtagccgccaaggaactgcaggccccg
tacgaactggtcgtcgaggtcgccaaggcaggcaagctgcctgtcaccatgttcaccgcc
ggcggcatcgccacccccgcagacgctgcgatgatgatgcagctcggcgccgaaggcgtc
ttcgtcggatcaggtatcttcaagtccggcaacccgaagcagcgcgccgaggcaatcgtc
aaggccaccacgttctacgacgacccggacgtgctcgccaaggtctcgcgcggactcggc
gaggcaatggtcggcatcaacgtcgacgacctgcccgtcggacaccgcctcgcagagcgc
ggttggtga
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