Rhodococcus sp. DN22: RA302_13825
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Entry
RA302_13825 CDS
T09949
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_13825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoo02000
]
RA302_13825
Transporters [BR:
rhoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RA302_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVX73230
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Position
2989965..2991695
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AA seq
576 aa
AA seq
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MLPRTRTLVRSMTFVAATAVAAGSLAACSESAEQVPSIGYAIDNSISTYNANTTAGSVSG
AMAAFGRVLPGFTFTGPAGAPVSDTDIGTASELPGDVLTVSYKLNPASVYSDGIPMSCDD
LVLTWAASSGKFTEDVDGAVKPMFDTANNLGYADIDRIDCQSGAKDATVFFKPGRSFTDW
RSLFGATALMPSHIVTQRTGVSDVVSAVNAGDTEALSKIADFWNTGWNLTPGQVDTSVLP
SAGPYRIDSYSTDDGLVLVANERWWGNKPATDRIVVWPRGVNLTEDLDKNSIEVVDVASG
SAGELGTPSGFDVQQIPSRSIEQFVLATSGSLGDEAARRAFAHCVPRTTLFEKFGQTENA
PQAGLGSGVVDSRLMAPDSLVYSDAAAVDGDRYANADIEAAKTSLSEADLDQLTVRVGYL
APDPVRAQIVSEAKAACAPAGITVEDASSDSFDPASLQSGGVDAVLSGMAGKVGAGGTAS
MIDARGALRSGNGANLGTYGNARIDQIIDQLNVDASTSAQLGLSVEAENILWTQVPTIPL
FNQLRTVAVAPGMSAVLVNPTRAATGWNMDRWVLRR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctcccaagaacacgcacactggttcgatcgatgacgttcgttgcggccaccgctgtg
gctgcgggttcgttggcggcctgctcggaaagcgccgagcaggttccgtccatcggatat
gccatcgacaactccatctccacgtacaacgccaacacgacagctggatcggtgtccggg
gcgatggccgcgttcggccgggtgcttcccggcttcacgttcaccggcccggccggagca
cctgtctccgacaccgacatcggaacggcgtcggagttgcccggtgacgtgctcacggtc
tcgtacaagctcaatccggcgtccgtgtactccgacgggattccgatgtcctgtgacgat
ctcgtcctcacctgggcggcgtcgagtggcaagttcaccgaagacgtcgatggtgccgtg
aagcccatgttcgacacggcgaacaatctcggatacgcggacatcgaccggatcgactgc
cagagcggggcgaaggacgcgacggtgttcttcaaacccgggcgatcgttcaccgattgg
cggtcgttgttcggtgcgactgcgttgatgccttcacacatcgtgacgcagcgcacgggt
gtcagcgacgtggtgagcgcggtgaatgccggtgacaccgaagcgttgtcgaagatcgcg
gacttctggaacaccgggtggaacctgactccaggtcaggtggacacctccgtactgccc
tccgctggtccgtatcgaatcgactcgtacagtaccgacgacggcctggtgctggtcgcg
aacgagcggtggtggggcaacaagccggcgaccgatcgcatcgtcgtctggccacgtggt
gtgaatctgaccgaggatctcgacaagaactcgatcgaggtagtcgacgtcgcttccggc
tcggctggcgaactcggtactccgtccgggttcgacgtccaacagattccgtcgcggtcg
atcgagcagttcgttctcgcgacctctggttcgcttggtgacgaagccgcccgtcgagcg
ttcgcgcattgtgttccgcgtacgactctgttcgagaagttcgggcagacggagaatgcg
ccgcaggcgggtttgggttccggcgtggtcgattcgcgactgatggcgccggattcactc
gtttacagcgacgccgctgcggtcgacggtgatcggtacgccaatgccgacatcgaggct
gcgaagacgtcgttgtcggaagccgacctcgaccagttgaccgtccgggtcgggtacctc
gcaccggacccggtgcgggcgcagatcgtctccgaagcgaaagccgcgtgtgctccggcg
ggaatcacggtcgaggacgcaagtagcgacagcttcgatcccgcgagtctgcagagtggg
ggagtcgacgccgtgctctccggcatggcaggcaaagtcggcgcaggcggaacagcgagc
atgatcgacgcgcgcggagcgctgcgatcgggcaacggcgcaaacctcggtacgtacgga
aatgccaggatcgatcagatcatcgatcagttgaacgtggatgcgagcacgagtgcgcaa
ttgggactctcggtggaggcggagaacatcctgtggacccaggtgcctacgattccactg
ttcaatcaactacgaactgtcgctgtagctccaggcatgtcggcagtgttggtcaatccg
actcgggccgctaccggctggaacatggacagatgggtactacgcagatga
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