Rhodococcus sp. DN22: RA302_15030
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Entry
RA302_15030 CDS
T09949
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhoo03051
]
RA302_15030 (pafA)
Enzymes [BR:
rhoo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
RA302_15030 (pafA)
Proteasome [BR:
rhoo03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RA302_15030 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WVX67866
LinkDB
All DBs
Position
complement(3286645..3288003)
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AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLIQLVNHDRAGERVLEELLIDAEARLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAETTTMLKVGSAALVLEMIEAGVSF
RDFALDNPIRAIREVSHDVTGKKPVRLAGGRQASALDIQREYHAKAVEHLRNREPDPQVE
QVVDLWGRTLDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRHGFDLSDPKIAQLDLAYHDI
KRGRGVFDVLQRKGLVKRVTEDETIDDAVENPPQTTRAKLRGDFITAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagacgaatcatgggtatcgagacggaattcggcgttacctgcacctttcacggg
cacaggagactgagccccgacgaggttgctcgttacctcttccgtcgtgtcgtgtcgtgg
ggtcgcagctccaacgtcttcctccgtaacggagctcgcttgtacctggatgtgggttcg
cacccggagtacgcgacggccgagtgcgacagcctcatccagctggtcaatcacgaccgt
gccggtgagcgtgtgctcgaagaactgctgatcgacgccgaggcgagactcgccgaggag
ggtattggtggcgacatctatctcttcaagaacaacaccgactcggccggaaactcgtac
ggctgccacgagaactttctcgtcgcgcgcgccggtgagttctcccgcatttcggatgtc
ttgttgccgttcctcgtcacgcgccagttgatctgcggcgccggaaaggtactgcagact
ccgaaggccgcgacgttctgcctctcgcagcgcgcggaacacatctgggagggcgtctcg
tcggctaccactcgctcgcgtccgatcatcaacacccgcgacgaaccgcacgcggacgcc
gagaagtaccgccgcctgcacgtgatcgtcggcgattcgaacatggccgaaacgacgacg
atgctcaaggtcggttctgccgcactggtgctcgagatgatcgaagccggggtgtcgttc
cgcgatttcgcgctggacaacccgattcgtgccatccgcgaggtcagtcacgacgtgacc
ggtaaaaagccggttcgccttgctggtggacgtcaggccagtgccctcgatattcaacgc
gaataccacgccaaggcagtcgaacatctgcgtaaccgcgaaccggacccgcaggtggag
caggtagtcgacctgtggggtcgcaccctcgatgccgtcgaagctcaggattttgcgaag
gtcgacacggagatcgactgggtcatcaagcgcaagctgttccagcgctaccaggaccgt
cacggtttcgacctgtccgatcccaagatcgcgcagctcgacttggcgtaccacgacatc
aaacgcggccggggtgtcttcgacgttctccagcgcaagggcttggtcaagcgggtcacc
gaggacgaaacgatcgacgacgccgtcgagaatccgccgcagaccacgcgcgccaaattg
cggggcgacttcatcaccgcagcccaggccgcaggccgggacttcacagtcgactgggtt
cacctcaagctcaacgatcaggcgcagagaacggtgctgtgcaaggacccgttccgctcc
gtcgacgagcgtgtcgagcgtttgatcgcttcgatgtag
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