Rhodococcus sp. DN22: RA302_15285
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Entry
RA302_15285 CDS
T09949
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00260
Glycine, serine and threonine metabolism
rhoo00630
Glyoxylate and dicarboxylate metabolism
rhoo00670
One carbon pool by folate
rhoo00785
Lipoic acid metabolism
rhoo01100
Metabolic pathways
rhoo01110
Biosynthesis of secondary metabolites
rhoo01200
Carbon metabolism
Module
rhoo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA302_15285 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RA302_15285 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RA302_15285 (gcvP)
00670 One carbon pool by folate
RA302_15285 (gcvP)
Enzymes [BR:
rhoo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RA302_15285 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
wHTH-HSP90_Na-assoc
ACT_8
Trypan_glycop
Motif
Other DBs
NCBI-ProteinID:
WVX67911
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All DBs
Position
complement(3344173..3347031)
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AA seq
952 aa
AA seq
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MIDAASRIFADRHVGPNAAELARILELVGVDSLDELATKAVPSVILDAAPNGIAAGLDAL
PLPVGEHEALAELTALAAQNTVATSMIGLGYFDTLTPPVLLRNIIENPAWYTAYTPYQPE
ISQGRLEALLNFQTMVADLSGMELANSSMLDEATAAAEAMTLLRRANRSKSPRFVVDADL
YPQTLAVIETRAEPLGIEIVSADLTAGLPEGDFFGVIAQIPGASGRVVDYTSIIAEAHER
GALVAVGADLLAMTLITSPGELGADACFGTTQRFGVPMGYGGPHAGYLAVHSKHARQLPG
RLVGVSIDADGDKAYRLALQTREQHIRREKATSNICTAQVLLAILAAMYASYHGAEGLKA
IALRVAARAHALANGLREGGVTVVHDSFFDTVLAQVPGKAADVVAAAKESGINLRLVDAD
HVGISCDEATTADHVLAVLDAFGIEDAVVAIEAEGNSVPAAQERTSDYLQHEAFTRYRTE
TAMLRYLRALSDKDIALDRSMIPLGSCTMKLNATAEMESITWPAFNAIHPFAPTSDAPGL
LKIIKDLEDWLVAVTGYDNVSLQPNAGSQGEYAGLLAIRNYHLSRGDDHRDTCLIPSSAH
GTNAASAVMAGMRVEVVACRPNGDVDVDDLRAKIADHAERLAAIMITYPSTHGVYEHEIA
DICAAVHDAGGQVYVDGANLNALVGLARPGRFGGDVSHLNLHKTFCIPHGGGGPGVGPIG
VRSHLTPFLPGHPMAPELGGGGTISAAPYGSASILPITWTYIRMMGAAGLRRASLTAIAS
ANYIARRLDEYFPVLYTGENGMVAHECILDLRGLTKDTGVTVDDVAKRLADYGFHAPTMS
FPVVGTLMVEPTESENLEEIDEFCEAMIAIRGEIDRVGAGEWTVEDNPLRGAPHTAGSIA
AQWDHPYSREIAVFPRGKARPKVWPSVRRIDGAHGDRNLVCSCPPIEAFAGN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgcaagccgtatatttgccgaccgccatgtcggtccgaacgccgcggaa
ctcgcgcgcatcctcgaactcgtcggggtcgattcactcgacgaactggcaaccaaggcc
gttccctccgtcatcctcgacgctgccccgaacggcatcgctgccggactcgacgctctg
ccgcttccggtcggagagcacgaggcacttgccgaactgactgcactcgcagcccagaac
accgtcgcgacgtcgatgatcggtctcggctacttcgacacgttgacgccgccggtgttg
ttgcgcaacatcatcgagaacccggcctggtacaccgcgtacaccccgtatcagccggag
atcagccagggccgtctcgaagccctcctcaacttccagaccatggtcgccgatctctcc
ggcatggaactggcaaactcgtcgatgctcgacgaggccaccgccgctgccgaagccatg
acgctcctgcgccgcgcgaaccgcagcaagtccccacgatttgtcgtcgacgccgatctc
tacccgcagaccctcgccgtcatcgagactcgcgccgagccgctcggcatcgagatcgtc
tctgcggacctcaccgctggtcttccggaaggtgacttcttcggcgtcatcgcccagatc
ccaggtgcctcgggacgagtcgtcgattacacctcgatcatcgcggaagctcacgagcgc
ggcgcactggttgccgtcggcgcagacctcctcgcgatgacgctcatcacctcacccggt
gagctcggtgcggatgcgtgcttcggaaccacccagcgtttcggtgttcccatgggatac
ggcggaccgcacgccggttacctggccgtgcactccaagcatgcgcgtcagctgcccggc
cgcttggtcggcgtctccatcgacgccgacggagacaaggcataccgcctggcgctgcag
acacgtgagcagcacattcgccgcgagaaggcgacgtccaacatctgtaccgctcaggtg
ctcctcgccatcctcgctgcgatgtacgcgagctaccacggcgccgagggactcaaggcg
attgcgttgcgcgtcgctgcccgcgcacacgcgttggcaaacggcctgcgcgaaggcggc
gtgaccgttgtccacgattcgttcttcgacaccgtgctcgctcaggttccgggcaaggcg
gccgacgtcgtcgctgcggccaaggaatccgggatcaacctgcgtctggtcgatgccgat
catgtcggtatctcctgcgacgaggccacgaccgccgaccacgtccttgccgtgctcgac
gcgttcgggatcgaggatgctgttgtcgccatcgaagccgagggcaattcggttccggct
gctcaggagcgcacctccgactacctgcagcacgaagccttcacccgttaccgtacggaa
acggcaatgcttcgctacctgcgcgcgctgtccgacaaggacatcgccctcgatcgcagc
atgatcccgctgggttcgtgcaccatgaagctcaatgcgaccgccgagatggaatccatc
acctggcccgcgttcaacgcgatccatccgttcgcgccgacatcggatgcgcccggtctg
ctgaagatcatcaaggatctcgaagactggctggtcgcggtcaccggctacgacaacgtc
agcctgcaacccaacgccggcagccagggggaatacgcgggcctgcttgcgatccgcaac
taccacctcagccggggcgacgaccaccgcgacacctgcctcattccgtcgagtgctcac
ggcaccaacgcggcttctgccgtcatggccgggatgcgcgtcgaggttgtcgcctgccgt
cccaacggtgacgtcgacgtcgacgatctgcgcgcgaagatcgccgatcacgccgagcgt
ctcgccgcgatcatgatcacctacccttcaacgcacggtgtctacgagcacgagatcgcc
gacatctgcgcagcggtacacgacgccggtggccaggtgtacgtcgacggcgccaacctc
aatgcgcttgtcggccttgcccgtccgggccgattcggcggcgacgtcagccacctgaat
ctgcacaagaccttctgcatcccgcacggcggcggcggacccggcgtcggcccgatcggt
gtgcgctcacacttgacgccgtttttgcccggacacccgatggcccccgaactcggtggt
ggaggaacgatctcggcagcgccgtacggcagtgcgtccattctgcccatcacctggacc
tacatccggatgatgggtgctgcgggcctgcgccgcgccagcctgaccgccatcgcgtcg
gccaactacatcgcgcgtcgactcgacgagtacttcccggttctctacaccggcgagaac
ggcatggtcgcgcacgagtgcatcctcgacctccgggggttgaccaaggacaccggcgtc
accgtcgacgacgtcgcaaagcgtctggccgactacggtttccatgctccgaccatgagc
ttccccgtggtcggcacgctgatggtcgagcccaccgagagcgagaacctcgaagagatc
gacgagttctgcgaggcgatgatcgccattcgcggcgaaatcgatcgcgtcggagcgggc
gagtggacggtggaggacaacccgctacgcggtgctccccacactgcgggaagcattgca
gcgcagtgggatcacccgtactcgcgtgagatcgccgtcttcccgcgtggcaaggctcgc
ccgaaggtgtggccgtccgtgcgtcgtatcgacggtgcacatggcgaccgcaacctggtc
tgctcctgcccgccgatcgaagcgttcgcaggcaactaa
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