Rhodococcus sp. DN22: RA302_15475
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Entry
RA302_15475 CDS
T09949
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhoo03036
]
RA302_15475 (xerD)
Chromosome and associated proteins [BR:
rhoo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RA302_15475 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
WVX67943
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All DBs
Position
complement(3385871..3386794)
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AA seq
307 aa
AA seq
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MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLHGRGIDDVAGVTENDVTEFVTH
LRLGDKDSGVVPLAASSAARTLIAVRGFHKFSAAEGLVSVDVARTVKPPTPGRKLPKALP
LDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLK
GKGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRGVPALFLNARGGRLSRQSAWQILQDAA
ASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREVWA
QAHPRAR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcccgacaggtggactcgtatctcgaccatctagcggtcgagcgaggatctgcg
cgcaatactctactttcctatcgccgcgacctgaatcggtacgcggagtacctgcacgga
cgcggcatcgacgacgtcgcgggcgtgacggagaacgacgtcaccgaattcgtgacacat
ctgcgcctgggtgacaaagattccggcgtcgtaccattggcggccagttcggcagcacgc
accctgatcgcggttcgcggattccacaagttttccgccgccgaaggtctggtcagcgtc
gacgtggcccgaacggtcaagccgccgacgcccggacgcaagctgcccaaggccctgcct
ctcgacgacgtgatcgccctgctcgacgcttcgggtggcggtgcggccggtgacgggccc
cgcgacctgcgggatcgcgctctgctcgagctcctgtactcgaccggagcgcgaatcacc
gaggcgatcgatctggacgtcgacgacatcgataccgaaactcgttccgtgctgctcaag
ggcaagggcggcaagcagcggatcgtccccgtcggcaggccggcgatcgccgccgtcgac
gcgtatctcgtccgcgggcgccccagcctggcgacgcgcggtgttcctgccctctttctc
aacgctcgcggtggacgcctctcgcgtcagagtgcatggcagattcttcaggacgcggcg
gcgtccgccgggatcaaggcggacgtctcaccccatacgctcaggcactcgtttgccaca
cacctgctcgacggcggcgcggacgtacgcgtcgtgcaggaacttctcggtcacgcttcg
gtaaccacgacgcagatctacacactggtcaccgtcaccgcgttgcgcgaagtgtgggct
caggcacacccgcgtgcccgttag
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