Rhodococcus sp. DN22: RA302_15805
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Entry
RA302_15805 CDS
T09949
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo03030
DNA replication
rhoo03410
Base excision repair
rhoo03420
Nucleotide excision repair
rhoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA302_15805 (polA)
03410 Base excision repair
RA302_15805 (polA)
03420 Nucleotide excision repair
RA302_15805 (polA)
03440 Homologous recombination
RA302_15805 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoo03032
]
RA302_15805 (polA)
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_15805 (polA)
Enzymes [BR:
rhoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA302_15805 (polA)
DNA replication proteins [BR:
rhoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RA302_15805 (polA)
DNA repair and recombination proteins [BR:
rhoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RA302_15805 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RA302_15805 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
baeRF_family2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
WVX68001
LinkDB
All DBs
Position
complement(3457177..3459924)
Genome browser
AA seq
915 aa
AA seq
DB search
MSPATTTRSSTSTAPAGTTGKADDRPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAV
YGFTSMLINLLRDEQPTHLAAAFDVSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVL
GALGIPVMAEEGFEADDVIATLTTQAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVS
ELTRFTPTAVEEKYSLSPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLV
DNVDKVRGKVGDSLRENLANVLLNRQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDL
EFKVLRDRLFATLSSSEPEAEEGFEVSGDALAPGAVAAWLDAHARTGERHGVTVLGTRTP
FAGDVTALAIAASDGECAYIAASTATPEDEAALGDWLADASQPKALHEAKWAIHALRGRG
WTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKRELRAETSGQEQLSLLDDTEQLDAE
AAETAMLSAQAVLDLAAALDTELESIESKSLLSDMELPLTIELAQIEATGIAVDSAHLHD
LQSRFASQVADAANSAYEVIDKQINLGSPKQLQVVLFEELDMPKTKKTKTGYTTDAEALQ
GLFDKTGHPFLEHLLAHRDATRMKVTVDGLLKAVAEDGRIHTTFNQTVAATGRLSSTDPN
LQNIPVRNDAGREIRDGFVVGQGFDVLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLH
SFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAYGLASQLKISTEEAKQQMDAYFAR
FGGVRDYLHAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAAD
IIKVAMINVQKALADAGLKSRMLLQVHDELVLEVVASELEEVTALVKDKMATAIELSVPL
DVSVGTGRSWDSAAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcaaccacaactcggtccagcacgtccaccgctccagccggcaccaccggc
aaggcggacgatcgccctctcttgatgcttctcgacgggcattcgttggcgtttcgcgcc
ttctacgcgctgcctgcagagaacttcaagacacacagtgggcaggccaccaacgcggtg
tacggcttcacgtcgatgttgatcaaccttcttcgtgacgagcagcccacccacctggcc
gcggccttcgacgtgtcgcgtcagacgtttcgcgccgacctgttccccgaatacaaggcg
cagcgcgcgaaggctccggacgaattcaagggccagatcgacatcaccaaggacgttctc
ggcgcgctgggcatcccggtcatggccgaggaaggtttcgaagccgacgacgtgatcgcc
accttgaccacgcaggcggaggccctcggataccgggttctcgtcgtgaccggtgaccgt
gactcgctgcaactggtgaccgacaacgtcactgtgctctacccgaagaagggtgtctcg
gagctcacccgattcacgccgacggccgtagaggagaagtacagcctcagcccggcgcag
tatcccgattttgctgcactgcgcggcgacccgagtgacaacctccccggcatccccggc
gtcggcgagaagaccgccaccaagtggatccgtgagtacggcgacctgcagggactggtc
gacaacgtggacaaggtccgcggcaaggtgggcgactcactgcgggagaacctcgcgaac
gtcctgctcaatcgtcagctcaccgaaatggttcgcgacgttcccttgccgtacacgccc
gagcagttggtgttggccccgtgggaccgcgagaagattcatgcgttgttcgacgatctc
gagttcaaggttctccgcgatcgactgttcgcgaccctgtcgtcgtccgagcccgaagca
gaggaagggttcgaggtcagcggcgacgcactcgccccgggtgcggttgccgcgtggctc
gacgcccacgcacgaaccggtgagcgtcacggcgtgacggtgctcggaaccagaactccg
tttgccggcgacgtcactgcactcgcgatcgcggcctccgacggtgaatgtgcatacatc
gcggcgtcgacggcaacaccggaagacgaagcagctctcggtgattggctcgccgacgca
tcacagccgaaggcgctgcacgaagccaagtgggcgatccatgctctgcgtgggcgcggt
tggacgctcggtggactgaccagcgacactgctctggccgcgtacctcgtccggccgggc
cagcgcagcttcaatctcgacgacctctcgctccgctacctcaagcgtgaactgcgcgcc
gaaacatccggccaggaacagctttcactgctcgacgacaccgaacagctcgatgccgaa
gcggccgagaccgcgatgctcagcgctcaggccgttctcgacttggcggctgcactggac
accgagttggagtcgatcgaatccaagtcgctcctctccgacatggaactgccgttgacg
atcgagctcgctcagatcgaggccaccggcatcgccgtcgacagcgcgcatctgcacgat
cttcagagccgtttcgcctcccaggtcgccgacgccgcaaactcggcctacgaggtgatc
gacaagcagatcaacctgggttcgccgaagcagctgcaggtggtcttgttcgaagaactc
gacatgcccaagacgaagaagacgaagacgggctacaccaccgacgccgaggcgttgcag
ggtctgttcgacaagacaggacacccgttcctcgaacaccttctcgcgcaccgtgatgcg
acgcgtatgaaggtgaccgtcgacggtcttctcaaggccgtagccgaagacggacgcatt
cacacgacgttcaatcagacggttgccgcgaccggacgcctgtcgtcgaccgatccgaac
ttgcagaacatcccggtgcgaaacgacgcggggcgcgagattcgcgacggattcgtagtc
gggcaggggttcgacgttctgctcactgccgactacagccagatcgaaatgcgcatcatg
gcgcacgtgtcaggcgacgaggggctgatcgaggcattcaacaccggtgaggacctgcac
agctttgtcggctcgcgtgcattcggtgtaccgatcgaagaggtgactcctgaactgcgt
cgccgggtcaaggcgatgtcgtacggtctggcctacgggctcagtgcctacggattggcg
tcgcagctgaagatttcgaccgaagaagcgaagcagcagatggatgcgtacttcgctcgt
ttcggcggcgtgcgggattacctccacgcggtggtcgagcaggcacgtaaggacggctac
acctcgacgctctacggtcgtcgtcgctacctgccggacctcaacagcgacaaccgtcaa
cgtcgtgaggttgccgaacgtgctgccctcaatgcgccgatccagggcactgcggccgac
atcatcaaggtggcgatgatcaacgtgcagaaggctctcgccgacgccggattgaagtcg
cgcatgctgttgcaggtgcacgacgaattggtgctcgaagtggttgcctccgagttggag
gaggtcaccgcgctggtcaaggacaagatggccacagccatcgagctgtcagtacctctg
gatgtttcggtgggaaccggtcgaagctgggacagcgcggctcactag
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