Rhodococcus sp. DN22: RA302_16920
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Entry
RA302_16920 CDS
T09949
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00250
Alanine, aspartate and glutamate metabolism
rhoo00410
beta-Alanine metabolism
rhoo00430
Taurine and hypotaurine metabolism
rhoo00650
Butanoate metabolism
rhoo01100
Metabolic pathways
rhoo01110
Biosynthesis of secondary metabolites
rhoo01120
Microbial metabolism in diverse environments
rhoo02024
Quorum sensing
Module
rhoo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RA302_16920
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RA302_16920
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RA302_16920
00430 Taurine and hypotaurine metabolism
RA302_16920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_16920
Enzymes [BR:
rhoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
RA302_16920
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SAM_1
Motif
Other DBs
NCBI-ProteinID:
WVX68201
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Position
3731311..3732702
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AA seq
463 aa
AA seq
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MPEPRRSDHTDYVAVNPIFSRPGEDSVASKYTLEPDGMLPETAYQIVHDETMLDGNARLN
LATFVSTWMDDHATKLYAESFDKNMIDKDEYPQTAAIETYCWRILADLWHSPSPKDAIGT
STIGSSEACMLGGLAMKRRWQHARKAAGKSTEKPNLIMSSAVQVCWEKFCNYWDVEARYV
PISEEHRTLDGHDLDKYVDENTIGVVAIMGVTYTGMYEPVLEISKALDAIQTKTGLDVPI
HVDGASGAMIAPFLQPELEWDFRLPRVHSINTSAHKYGLVYPGLGWVVWRSQDLLPDDLV
FKVSYLGGSMPTFALNFSRPGAQVILQFYLFLRLGHDGYRAIQQSSQDVAKFLAEGIGKL
DAFELWNDGSDIPVFAWRLAEGHTSNWTLYDLSDRLRGKGWLVPAYPMPDDLADLTVQRI
VVRNGLSMDLAANLLRIIEEETAFLDELDSPMPRPRVTEGFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacccagaaggtcagatcacaccgattacgtagccgtcaatccgatcttctcg
aggcctggcgaggattcggttgcatcgaagtacacactcgaacccgacggcatgcttccc
gagaccgcgtatcagatcgtccacgacgaaacgatgctcgacggcaatgcgcggctcaat
ctcgcgacgttcgtcagcacgtggatggacgatcacgccaccaaactgtatgccgagtcg
ttcgacaagaacatgatcgacaaggacgagtatccgcagaccgccgcgatcgaaacctat
tgctggcgcatccttgccgacctctggcactcaccctcccccaaggacgcaatcggcacc
tcgacgatcggttcgtccgaagcctgcatgctcggcggcctggcgatgaaacgacgctgg
cagcacgcacgaaaagccgcgggcaagtccaccgaaaagccaaatctcatcatgagttcc
gcggtccaggtgtgctgggagaagttctgcaactactgggacgtcgaagcgcgttacgtg
ccgatcagcgaggaacaccgcaccctcgacggtcacgatctggacaagtacgtcgacgag
aacaccatcggcgtcgtcgcgatcatgggcgtcacgtacaccgggatgtacgagccggtc
ctggaaatctcgaaggcactcgatgcgatccagacgaagacgggactcgacgtccccatc
cacgtcgacggcgcttccggtgcgatgatcgcaccgttccttcagcccgaactcgaatgg
gatttccggctcccgcgcgtccactccatcaacacctcggcgcacaagtacgggctcgtc
taccccggcctcggctgggtggtctggcgatcgcaggatctacttcccgacgacctcgtc
ttcaaggtgagctacctcggcggcagtatgccgaccttcgcactgaacttctcgcgtccc
ggcgctcaggtgatcctgcagttctacttgttcctgcgtctcggccacgacggctatcgc
gcgatccagcagtcctcccaggacgtggcgaaatttctcgccgaagggatcgggaaactc
gacgcgttcgaactgtggaacgacggttccgacatcccggtcttcgcgtggcgcctcgcc
gaggggcacacgtccaactggacgttgtacgacctctcggaccggttgcgaggcaagggc
tggttggtgccggcctaccccatgccggacgatctcgcggatctgacagtgcagcgcatc
gtggttcgtaacggactgagcatggacctggcggccaatctgctgcgcatcatcgaagag
gaaaccgcgttcctcgacgaactggacagcccgatgccgcggccgcgcgtcaccgaggga
ttccatcactga
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