Rhodococcus sp. DN22: RA302_17000
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Entry
RA302_17000 CDS
T09949
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00470
D-Amino acid metabolism
rhoo00550
Peptidoglycan biosynthesis
rhoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA302_17000 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA302_17000 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoo01011
]
RA302_17000 (murD)
Enzymes [BR:
rhoo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RA302_17000 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoo01011
]
Precursor biosynthesis
Amino acid ligase
RA302_17000 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WVX68216
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Position
complement(3749157..3750680)
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AA seq
507 aa
AA seq
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MTSSADSENDLSWLRGTRVLVAGGRVSGQATIEPLVALGAVVTVADSTLDFAERCAELGA
GMVTTTSIEDAPDSITEYGLVVTSPGFRPDAPILAAAAGHGIPIWGDVEFSWRVDHSGHF
GTPRKWLVVTGTNGKTTTTSMLASILDAAGVVGRACGNIGLPILDALAETSPRVEYLAVE
LSSFQLHWAPSVRPDAGVVLNVAEDHLDWHGGMSAYAEAKSRALSGKVAVVGLDDAIASE
LGTRATADIVTGFRLGEPGEGELGVEAGHLVDNAFGDHVRLAEAASIDPAGPAGVMDALA
AAALARALGFEADVVERGLAAHKVGPHRGALVGRVGSVVYIDDSKATNPHAARPSILAHD
RVVWVAGGLLKGASVDQLVSEVGPRLSGAVLLGRDAGVIEDALARHAPDVPVVHVMSGDD
AVVSENSSNSTLTIRLPSGADADAVMAAVVVEAAELASPGDAVVLAPAAASLDMFASYGH
RGDSFAAAVAALPDPFTDSPGQAGNLL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctcagcggattccgagaacgacctgtcctggctccgcggtacgcgagtgctg
gtcgccggtgggcgggtgtccggtcaagcgaccatcgaacctctcgtcgccctcggtgct
gtcgtgacggttgccgattcgaccttggacttcgcggagcgctgcgcggagctcggcgcg
ggcatggtgaccaccacctcgatcgaggatgctccggattcgatcaccgagtacgggctc
gtagtcaccagtcccggctttcggccggatgcaccgatccttgcagccgccgccggtcac
gggattcccatctggggagacgtcgagttctcctggcgcgtcgaccacagcgggcacttc
ggcacaccccgtaaatggctcgtcgtgacggggacgaacggaaagaccacgacgacgtcg
atgctggcctcgattctcgacgccgccggagttgtcggccgagcctgcggaaacatcggg
ctgccgatactcgacgcactcgccgagacgtcgccgcgcgtggagtacctcgctgtcgaa
ctgtcgtccttccaattgcactgggcgccttcggtgcgtccggatgccggcgtggtcctc
aacgtcgccgaggatcacctcgactggcacggcggaatgagcgcgtacgccgaggccaag
tcgcgggcgctgagcggaaaggtcgcggtggtcggcctcgatgacgcgatcgcttccgaa
ctgggaactcgcgcaactgcagacattgtcaccgggttcagattgggtgaaccgggcgaa
ggagaactgggtgtcgaagcgggacacctcgtggacaacgcattcggcgatcacgtccgc
ttggccgaagcagcgtcgatagatcccgccggcccggcaggcgtcatggacgcgctggcc
gccgccgcgttggcgcgggcactcggattcgaggcagacgtcgtcgaacgcggtctggcc
gcacacaaggtcggcccacaccgaggggcgctggtcggccgtgtcgggtccgttgtgtac
atcgacgactccaaggccaccaatccgcacgcagcccgaccgtcgatactcgcgcacgat
cgcgtcgtctgggttgcaggcggtctgctcaagggagccagcgtcgaccaattggtgagc
gaagtcggccctcgactctccggcgctgtccttctcgggcgtgacgctggtgtgatcgag
gacgcgctcgcgcgacacgcgcccgatgttcccgtggtgcacgtgatgtcgggggacgat
gcagtggtgagcgaaaacagcagcaactcgactctcaccatccggctgccgtcgggtgcc
gacgcggatgccgtcatggccgcagtggtagtcgaagctgccgagttggcgtcccccggt
gatgcagttgtactcgccccggccgccgcgtccttggacatgttcgccagctacggacat
cgtggtgacagcttcgccgccgccgtcgccgcattacccgatccgttcacggattcgcct
ggccaagccgggaacttgctatga
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