Rhodococcus sp. DN22: RA302_18630
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Entry
RA302_18630 CDS
T09949
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00300
Lysine biosynthesis
rhoo00470
D-Amino acid metabolism
rhoo01100
Metabolic pathways
rhoo01110
Biosynthesis of secondary metabolites
rhoo01120
Microbial metabolism in diverse environments
rhoo01230
Biosynthesis of amino acids
Module
rhoo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RA302_18630 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA302_18630 (lysA)
Enzymes [BR:
rhoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RA302_18630 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WVX68514
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All DBs
Position
4093842..4095185
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AA seq
447 aa
AA seq
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MTLLEIFPSLRGAMTPRMDPALWPISTRHDHSGRVCIGDVSLEEIADQYGTPTYVVDEAD
VRHRCRTYREIFPDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGELAVALAAGVDPHR
IILHGNAKSVSELRAAVNAGVGRIVLDSPSEAVRLASVCTHRQKVLIRVTPGIDIHGHKA
VSTGILDQKFGLPAFSEELERTVSVVANATHLQLIGLHCHLGSQITDPELFRPAIETMIA
QMDDIRRTHRIILTELDLGGGHGIAYMPGDAQLDLTRLAHVIDETLDDACIRNRFPRPEI
VLEPGRAIAARAGVTLYRVQNIKTISGGRTFVSVDGGMSDNPRVSLYDSHYDVELVNRHS
RAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHHSMASTYNSVGRPPV
VAVLGGIARPLIRRESINDLLAREVGI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctactcgaaatcttcccctccctacgcggcgcaatgacaccgcgtatggatcct
gcgttgtggcccatcagtactcgccacgaccacagcgggcgtgtctgcatcggcgacgtc
tccctcgaagagatcgcggaccagtacggcacaccgacgtacgtcgtcgacgaggcggac
gtgcggcaccgctgccgcacgtatcgagagatcttccccgactcggagatcgtgtacgcc
ggcaaggcactgatgattcgagcgatggctacctgggtctccgacgagggactcggggtg
gatgtctgttccgccggtgaactcgccgtcgcgcttgccgcgggcgtggacccccaccga
atcatcctgcacggcaatgccaaatcggtttccgaactgagggcggcggtcaacgcgggt
gtcggccggatcgtcctcgactcccccagcgaagcggtacggctcgcgtcggtgtgcacc
cacagacagaaggtgttgatcagagtcacacccggcatcgacatacacggacacaaggca
gtgtccacaggcatcttggaccaaaagttcggcctaccagcgttttccgaagaactggaa
cgtacggtatccgtcgtcgccaacgcgacgcacctgcaactcatcggcctgcattgccat
ctcggctcccagatcaccgatcccgaactcttccgcccagcgatcgagacgatgatcgca
cagatggacgacatacgacgcacgcatcgaatcatcctcaccgaactcgatctcggcggt
ggccatgggatcgcatacatgccgggagacgcccaactggatctgacccgcctcgctcac
gtcatcgacgaaactctcgacgacgcgtgcatccgaaaccgcttccctcgccccgaaatc
gtgctcgagcctggccgagcgatcgccgcgcgcgccggagtcacgctctatcgcgtacag
aacatcaagacgatcagcggcggtcgaaccttcgtttccgtcgacggcgggatgagcgac
aaccctcgggtgtcgttgtacgacagccactacgacgtcgaactggtgaaccgacattcg
cgcgcaccgctccaggaagtaaccgtcgccgggcgacactgcgaatcgggcgacgaaatt
gccgtcggagcaaggcttcccgccgacctacatgaaggtgacctgttggcagtgccgtgt
acgggcgcataccaccacagcatggcctccacctacaacagcgtcggccggccgccggtc
gtcgccgtgctgggcgggattgcgcggccgttgatcaggcgcgaatcgatcaacgacctg
ctggcccgcgaggtcggcatctga
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