Rhodococcus sp. DN22: RA302_19905
Help
Entry
RA302_19905 CDS
T09949
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
rhoo
Rhodococcus sp. DN22
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
AAA_19
PDDEXK_1
ResIII
NAT10_TcmA_helicase
Viral_helicase1
AAA_16
AAA_22
Cas_Cas4
SLFN-g3_helicase
UvrD_C_2
DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WVX68743
LinkDB
All DBs
Position
4404261..4407704
Genome browser
AA seq
1147 aa
AA seq
DB search
MFLLDDQIVYSASDLSAAASCEFALLRQLDARTGLIAAEAAEADPMLERTSSLGDSHERE
QLQKFIDQHGDGVVVMPRPEHSRAGLTAATLATVEAARSGAPVIYQGTFFDGRFLGFCDF
LVREGDTYAVYDSKLSRHAKVSALLQLAAYADALERNAIAASDQVHLLLGDGSTSSHDIG
DIAPVFAARRAELERVLDEHRAEGKPTQWLDDRYLRCGRCDTCSVEVESHRDLLLVAGVR
GNQREQLIVSGITTIDELAASTGPVEGIRRETLDKLRAQAAVQLRQELSGDAEFEVYEPS
ALGGLPIPDDGDIFFDFEGDPLWAEDGSTDWGLEYLFGVVEGPADDYVFKPFWAHDREGE
RQALLDFLDYVTARREAHPGMHIYHYAAYEKSALLRLAARHGVGEQTVDTLLSENVLVDL
YPIVRACLRIGQRSYSIKKLEPLYMGEHGRDGDVTNAAASVVAYADYCELRDGGQADQAR
ELLQGISDYNEYDCESTLRLRDWLAERAAEHGVELREPTGQIKIPLEELTESEIALRDFA
GHKAGSTRTSDQQAAALLAAAVGYHNRERKPYWWAHFDRLVTPIEDLVDIRDVMVVEQSE
IETDWHKSTARQKKFRRHIQLTGSFGTGTSLSPGSDLFALYATPSPDAVASENPTQRGTS
SVKVTAVVKSEGLDVVTVEELLSGDEYIDSPVALAPGRPIPTGRMEKSIAAAASDASESL
PELPHIAAVDILRRSTPRTLSGSALPPVGTDNNYADAITAALLDLDDSYVAVQGPPGTGK
TYTGARVVKTLIEQHHWRIGVVAQSHSVVENMLGGILKAGVDPALVAKKGSRSKTAEWQD
IASEEYAGFIAEAEGVGCVIGGTAWDFANTDRVPAGSLDLLVVDEAGQFALANTIAVAIS
ARNLLLLGDPQQLPQVSQGTHPEPVDESALGWLAEGHGALPPELGYFLEKTWRMHPDLCA
PVSALSYEGKLRSQETVSAARKLDGLAAGVHTVFVDHRGNSTYSPEESQEIVRQIQGLLG
TPWTDPSEFEGTRPLEQSDILVVAAYNAQVGTVERDLTEAGLTEVEVGTVDKFQGREAAV
AIVSMAASAVEDVPRGMSFLLSRNRLNVAVSRGKWCAIIVRSHALTQYMPSTPAGLVELG
AFMRLTS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctactcgatgatcagatcgtctacagcgccagcgacctctcggctgcggcctcg
tgcgagttcgcactgctgcggcaactcgacgcccgaaccggtctgatcgcggccgaggcc
gccgaggcggatccgatgctcgaacggacgtcgagcctcggcgactcgcacgagcgcgaa
cagcttcagaagttcatcgatcagcacggagacggcgtcgtcgtcatgccgcgaccggaa
cactcacgcgcaggcctgaccgctgccacgttggccaccgtcgaggcagcacgatcgggc
gcgccagtcatttatcagggaacctttttcgacggccgattcctcgggttctgcgatttc
ctcgtccgcgaaggcgacacctacgcggtctacgacagcaagctctcccggcacgccaag
gtgtcggcacttctacaactcgccgcatacgcggatgcgttggagcgcaatgcaattgcc
gcctccgatcaagttcatctactgctaggcgacggcagcacgtcgtcgcacgacatcgga
gacatcgcgccggtattcgcggcacgtagagctgaactcgaacgagtcctcgacgagcac
cgcgccgaggggaaaccgacacagtggctcgacgatcggtacctgcgttgtggtcgatgc
gacacctgcagcgtcgaggtcgaaagccatcgagacctgctgctggttgcgggtgtccgc
ggcaatcagcgtgaacagctgatcgtctcggggatcacgacaatcgacgaactcgccgcg
agcaccggcccagtcgagggaatccgccgggaaacactcgacaagctccgtgcacaggca
gcggttcaactacgccaggaactgtccggcgacgccgaattcgaggtctacgaaccctcg
gcgctcggcggactccccatccccgacgacggcgacatcttcttcgacttcgagggcgat
ccgctctgggccgaggacgggtccaccgattgggggttggagtatctgttcggtgtggtc
gaagggcctgcggacgactacgtgttcaagccgttctgggcacacgatcgcgagggtgag
cgccaggcgctcctcgacttcctcgattacgtcaccgcgcgtcgagaagctcatccaggc
atgcacatctaccactacgccgcgtacgagaaatcggcgctgttgcgcttggccgcacgt
cacggtgtcggcgagcagaccgtggacaccctgctcagcgagaacgtgctcgtagacctg
tacccgatcgtccgcgcgtgcctgcggatcggacaacgctcgtacagcatcaagaaactc
gagccgctctacatgggtgagcacggccgtgacggtgacgtgaccaacgccgccgcctcg
gtcgtcgcttatgccgactactgcgaattgcgcgacggcggacaagccgaccaggccagg
gaacttcttcagggcatctccgactacaacgagtacgactgcgaatccactctccgcctg
cgcgattggctcgccgagcgcgccgcagaacatggtgtcgaacttcgagagccgaccgga
cagatcaagattccactcgaagaactcaccgaatcggaaatcgcactccgcgacttcgcc
ggccacaaggccggttcgacacgcacctccgatcagcaggctgctgctctattggccgca
gcagtcggttaccacaatcgcgagcggaagccgtactggtgggcccacttcgaccgattg
gtcacaccgatcgaagacctcgtggacatccgcgacgtcatggtggtcgagcagtccgaa
atcgaaacggactggcacaagagcaccgcgcggcagaagaagtttcgtcgccacatccaa
ttgaccggaagtttcggcaccggaacgtctttgagtccgggcagtgatttgttcgcgctc
tacgcaaccccctccccggatgccgttgcaagcgagaaccccacccagcgcggcaccagc
agcgtcaaggtcaccgccgtggtcaagtccgaagggctcgacgtggtcaccgtggaagaa
ctgctcagcggtgacgaatacatcgattcccctgtcgcgttggcacctggtcgtccgatt
cccaccggacgcatggagaagtccatcgccgctgccgcgtccgacgccagcgagagcctg
cccgaactgccacacatcgcggcagtcgacattctcaggcgcagcaccccgagaaccctc
tcgggttcagcgctgccacctgtcggcaccgacaacaactacgccgacgccatcaccgcc
gcacttctcgacctcgacgattcctacgtggcggtgcaaggtcctcccggtaccggcaaa
acctacacgggcgctcgtgtcgtcaagacactgatcgaacaacaccattggcgtatcggc
gtggtggcacaatcacattcggtggtcgagaacatgcttggcggcattctgaaggccggc
gtggaccccgcactggtcgcaaagaagggcagccgcagcaagaccgcggaatggcaggac
atcgcgtccgaggaatacgccggattcatcgccgaagcggaaggcgtcggctgcgtcatc
ggcggcactgcatgggacttcgcgaacaccgatcgtgttcccgccggcagtttggacttg
ctcgtggtcgacgaggcaggtcaattcgcgctggcgaacaccattgccgtcgcgatttcc
gcgcgaaacctgttgctgctgggcgacccgcagcagttgccgcaggtgagccaaggtact
caccccgaacctgtcgacgaatcggcactcggttggctcgccgagggacacggcgcactg
ccacccgaactcggctacttcctcgagaaaacgtggcggatgcacccggatctgtgtgcg
cccgtgtccgcattgtcgtacgagggcaagctgcgttcccaggaaaccgtcagtgcggca
aggaagctcgacggactcgctgccggagtacacacggtgttcgtcgatcaccgcggcaat
tccacctactccccggaagagtcccaggaaatcgttcgccagatccagggccttctcggc
acgccttggaccgacccgagcgagttcgagggaaccaggccgctggagcagtcggacatt
ctcgtggtcgcggcgtacaacgcccaggtgggcaccgtcgagcgcgatctcaccgaggcc
ggtctcacggaggtcgaggtcgggaccgtcgacaagttccagggccgcgaggctgcggtg
gcaatcgtgtcgatggccgcatctgccgtcgaggacgtcccgcgagggatgtcgttcctg
ctgtcgcgaaaccgtctcaatgttgctgtctcacgcggcaagtggtgcgcgatcatcgtt
cgatcgcacgcgttgacgcagtacatgcccagtacgcctgcgggattggtcgaactgggc
gcgttcatgaggctgacgagctag
DBGET
integrated database retrieval system
