Rhodococcus sp. DN22: RA302_21090
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Entry
RA302_21090 CDS
T09949
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RA302_21090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoo02000
]
RA302_21090
Transporters [BR:
rhoo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RA302_21090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_21
ABC_ATPase
AAA_16
AAA
AAA_5
AAA_18
Zeta_toxin
AAA_25
AAA_30
AAA_29
AAA_15
AAA_23
AAA_33
DUF2818
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WVX68961
LinkDB
All DBs
Position
complement(4657503..4659239)
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AA seq
578 aa
AA seq
DB search
MIRDLFRILGPQNQGRYREFLVWAVLYGVMQGLAVALLVPAVQALFDQNWGSFVRWLAAM
AVCAVISSIAHYLQAMKGFESALTLLRTMHLRLGDHLVTLPLGWFGAGRLGQVSQVASKG
TISVMGAAAHLMTPIISGIASPATIVVCMLFFDWRLGLALVVSVPILFAAARFASTMTAK
ADDRAHAAAVESNNRVLEYARCQPVLRAFGRTHGVYEPLDDAIEAQHTAGRSQLWFVVIG
SVVNGIALQFVFSAVIILGAFLALGGDIDPVTLIALLGLTARFIQPLGEIGEFGGAIRMA
RNEIRRMSEILEVEPMVEPDTSGTATGETAVQFDALDFGYADGGQVLRNISFDVPRKSLT
ALVGPSGSGKTTVTRLISRFYDVDSGVVRVGGVDVRDLTSADLMSQLSLVFQDVYLFDDT
LIANIRLGRPEATDEEVFDVARIAGVAEIVERLPRGWDTRVGEGGTALSGGERQRVSIAR
ALLKRAPVVLLDEATAALDPENEAHVQRAMQELARESTLLVIAHKLSTVVAADQIIVLGD
DGSIVEVGTHEVLLAAGGNYAAFWNQRHRASGWRLVAS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgacctcttccggatactcggcccgcagaatcagggccgatatcgcgagttc
ctggtgtgggcagtgttgtacggcgtgatgcagggtttggcagtggcgcttctggtccct
gcggtgcaggcactgttcgatcagaactggggcagtttcgttcggtggctcgccgccatg
gccgtatgcgctgtgatcagttcgattgcgcactacctgcaggcgatgaagggtttcgag
tcggccctcactctgctgcggacgatgcatctgcgcctgggagatcatctcgtcactctg
ccgctcggctggttcggcgccggccgactcgggcaggtatcgcaggttgccagcaagggc
accatctcggtgatgggggcggctgcgcacctgatgacaccgatcatctccggaattgcc
agcccggcaaccattgtcgtgtgcatgttgttcttcgactggcggctcgggttggcgctg
gtggtcagcgttccgattctgttcgcggcagccagatttgcctcgacgatgactgccaag
gccgacgatcgggcccatgcagcggccgtcgaatcgaacaatcgagtgctcgaatacgcg
cgttgccaaccggtcctgcgtgctttcggacgcacccacggggtgtacgaaccgctcgac
gacgcgatcgaagcgcaacacactgcgggtcgttcacaactgtggttcgtggtgatcggg
tccgtggtcaacgggattgccctgcaattcgtgttctctgccgtgatcatcttgggcgcg
ttcctcgcgctcggcggcgacatcgatccggtcacgttgatcgcgctactcggactgacc
gcacggttcatccagccgctgggtgagatcggcgagttcggcggtgcaatcagaatggca
cgcaatgaaatccggcgaatgtccgagatcctcgaagttgaaccaatggtcgaacccgat
accagcgggacggccacgggggagacggcagtgcagttcgacgccctcgacttcggatac
gcggacggtgggcaggttctgcgaaacatctccttcgacgtgccacggaagtcgttgacg
gcgttggtcggtccgtcagggtccggcaaaaccaccgtcacccggttgatctcgcgcttc
tatgacgtcgactccggtgtggtgcgtgtcggcggcgtcgacgtgcgggacctcacgagt
gccgacctgatgtcgcagctgtctctggtcttccaggacgtgtacctcttcgacgacacg
ttgatcgcgaacatccgcctcggccgccccgaagccacggacgaggaagtcttcgacgtg
gctcggatcgcgggcgtcgcggaaatcgtcgagcggcttccgcggggttgggacacccgt
gtcggtgagggcgggacggcactgtccggtggagagcggcagcgggtctccattgcgcgc
gcactcctcaaacgcgcacctgtcgttctgctcgacgaggcgacggccgcgctcgatccc
gagaacgaggcacacgtgcagcgtgcgatgcaagaactcgccagggaaagcacactgctc
gtgatcgctcacaaactgtcgaccgtcgtggccgcagatcagatcatcgtgctcggtgac
gacggatcgatcgtcgaagtgggcacccacgaagtcctgctcgcagccggtgggaactac
gccgcgttctggaaccagcgccaccgtgcgtcgggatggcggttggtggcaagctga
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