Rhodococcus sp. DN22: RA302_21580
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Entry
RA302_21580 CDS
T09949
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00020
Citrate cycle (TCA cycle)
rhoo00640
Propanoate metabolism
rhoo00660
C5-Branched dibasic acid metabolism
rhoo00720
Other carbon fixation pathways
rhoo01100
Metabolic pathways
rhoo01110
Biosynthesis of secondary metabolites
rhoo01120
Microbial metabolism in diverse environments
rhoo01200
Carbon metabolism
Module
rhoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhoo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA302_21580 (sucD)
00640 Propanoate metabolism
RA302_21580 (sucD)
00660 C5-Branched dibasic acid metabolism
RA302_21580 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RA302_21580 (sucD)
Enzymes [BR:
rhoo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RA302_21580 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WVX69052
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Position
complement(4750414..4751316)
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AA seq
300 aa
AA seq
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MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVAADGSPVEL
PVFATVEEAIKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY
NESKGKKTRIIGPNCPGIITPGEALVGITPANIAGTGPIGLVSKSGTLTYQMMYELRDFG
FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV
GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALAREILQSL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcttcctcaccaaggattcaaaggtcatcgtccagggcatcaccggcggcgag
ggcaccaagcacaccgctctgatgctcaaggccggcacccaggtcgtcggcggcgtcaac
gctcgcaaggccggcaccacggtctcgcacgttgcagctgacggttcccctgtcgagctc
cccgtcttcgcgacggtcgaagaggcaatcaaggagaccggcgcagacgtctccatcgca
ttcgttcccccggccttctcgaaggacgccatcgtcgaggccatcgacgcggagatcccg
ctcctcgtggtcatcaccgagggcatcccggttcaggactccgcttacgcttgggcgtac
aacgagtccaagggcaagaagacccgcatcatcggaccgaactgccccggcatcatcacc
ccgggtgaggccctcgtcggcatcacgcccgccaacattgcaggcaccggccccatcggc
ctggtctccaagtcgggcaccctgacctaccagatgatgtacgaactccgtgacttcggc
ttctccaccgccatcggcatcggcggcgacccggtcatcggaaccacccacatcgacgcc
atcgaggcgttcgagaaggatcccgagaccaaggtcatcgtgatgatcggtgaaatcggt
ggcgacgcggaagagcgtgcagccgattacatcaaggccaacgtcaccaagccggtcgtc
ggctacgtggcaggcttcaccgctcccgaaggcaagaccatgggccacgccggtgccatc
gtctccggttcctcgggaactgctcaggcaaagcaggaagctctcgaagctgcaggcgtg
aaggtcggcaagacgccgtccgctaccgctgctctcgctcgcgagattcttcagtccctg
taa
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