Rhodococcus sp. DN22: RA302_21600
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Entry
RA302_21600 CDS
T09949
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo03420
Nucleotide excision repair
rhoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RA302_21600 (pcrA)
03430 Mismatch repair
RA302_21600 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_21600 (pcrA)
Enzymes [BR:
rhoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RA302_21600 (pcrA)
DNA repair and recombination proteins [BR:
rhoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RA302_21600 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RA302_21600 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WVX69056
LinkDB
All DBs
Position
complement(4755856..4758348)
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AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHDAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTAAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASTPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacacgacgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgccggttcgccgttgctgatagtcgcgggcgccggctcgggcaag
actgcagtgctgacgcgtcgtatcgcctatctgctggccgaacggggtgtcacccccggt
cagatcctggccatcacgttcaccaacaaggctgcggccgagatgcgcgagcgtgtggca
gctcttgtcggaccgcgtgccaacgccatgtgggtctcgacgttccactccagttgcgtg
cggattctgcgagcacaggcggcgctcctacccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcggcttctcgccacgcatatctccaatctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaacttccgcgactgatc
gccaaggtctacggccactaccaacagcggctgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgtcgcgcttcttcaggcgtttccacagatcgccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcaatac
atgcttgtgcgtgaactggtcggcggtgccggcgagtccgaccacgccgttgccccggcc
gaactgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggatgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatttccaagaacacc
ggccgacgagaaaagcgtctgtggaccgattcgggtgaaggcgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcgtttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaagttcgccgacatcgcggtgttctaccggaccaacaactcctcg
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaggacgacaccgtgagcctgcgacgcattctcaacacgccccgacgcggtatcggtgat
cgagccgaagcctgcgtcgccgtgcactccgagcatcgcaacatcagcttcgccgccgct
ctccgtgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctaccgacagcggccgccgac
gaggacgaaccgttcgagctcggtgacatcggtgaggttgccgaggcggtgctcgagcgc
accggctaccgcgccgagcttgcggcgagcagcgatccgcaggatggcgcgcgactcgac
aacttgaacgaactcgtcagcgtggcaagggaattcagttccgacgcgcgaaacgcggcc
gggctgatcgatccggacgacgaggaaaccgcagcaatgcgtgaaggcgaacccgatccg
ggttcgcttgccgccttcctcgaacgggtatcgcttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtgaccatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggg
gatccggcagagctgtccgaagagcgtcgacttgcttacgtcggcatcacccgtgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcgtgggggcaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaactggcgtcgtgaggat
ccgggcaccggtggcggattcggaagcggcaggccgggttacggcagcggaagccgctac
ggcagccagggcggccagggatacggcggcgggcagaactacgggggagggtccggcaag
gccgcgtcgactcccagtttcggtgccgcgcgtggccgcaacaacgttctggtcctcgcc
acgggtgaccgcgtcagtcacgacaagtacggtctgggcaccgtgttggaaaccaagggc
actggccccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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