Rhodococcus sp. DN22: RA302_22360
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Entry
RA302_22360 CDS
T09949
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_22360
Enzymes [BR:
rhoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RA302_22360
DNA repair and recombination proteins [BR:
rhoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RA302_22360
Prokaryotic type
RA302_22360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WVX69203
LinkDB
All DBs
Position
complement(4909723..4911069)
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AA seq
448 aa
AA seq
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MSNSVIWFRRDLRVGDLPTLTAAADAGGQTLGLFVLDEKLLGPAGSPRQNQLFANLSALD
NQLDGRLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEKVELIATGSPY
AVAPGRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAGTVRWFDPREKDGGPRRVSIPA
PSGTVSDVVGETGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLA
DLSKRLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDEGVDADAAFTAW
CEGKTGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARYFMSQLVDGDLA
SNQHGWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAM
RPVDYPDPIVDHAHEREEALRRYGEIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaactctgtgatctggtttcgacgcgatctgagggtcggtgatcttccgactctg
actgcagcggcggatgccggcggacagacgttgggtttgttcgtcctcgacgagaagttg
ctcggaccggcaggctcaccccgccagaatcaactgttcgccaacttgtcggcactcgac
aaccagctcgacggacgattgatggttgttcgaggtgatccggcagacgtggtgccccgc
gtggcggaatccgttggcgccgaagaagttcacatcagtgccgactacgggccctacggc
cgacggcgcgacgcggccgtggccgagaaggtggagttgatcgccaccgggtcaccatat
gccgtggcgcccggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccg
tacttccgtcagtggatggaacatggttggcggggccccgcgtcgaccgatgcggggacg
gtccgttggttcgatccgagagagaaggacggtggcccgcgccgggtgagtatccccgcg
ccgtccggcaccgtcagcgatgtcgtcggtgagaccggtgcgctcgaacagtggaaagaa
tactgcgagaacgatcttgaccggtacgatgacgaacgaaatcgccccgacctcgacacc
acgagccggatgtcgatcccgctcaagtacggcacgattcatccgagaaccatgttggca
gatctctccaagcgactcggagacggcgctcaggcgtaccgtcgccagcttgcttggcga
gacttctacgcagacatcctgtttcagcgccccgacagcgcgcggaagaactacgacgac
aagttcgaccgtttacgtcacgacgagggagtcgacgcagacgccgccttcacggcctgg
tgtgaaggcaagaccggcttcccgatcgtggatgccggcatgcggcaactcgccgccgag
aactggatgcacaatcgggtccgaatgatcgtcgcgtcattcctggtgaaggacctgcac
attccgtggtggcgcggcgcacggtacttcatgtcgcaactggtggacggtgacttggcc
tccaatcagcacgggtggcagtggactgccgggtcgggtacggatgcttcgcctttcttc
cgcgtcttcaacccgatcacgcaaggggagaagttcgatcccgacggcacatacgtccgt
cggtgggtccccgaacttcgcgatgttcccgggaaggccgtccactcgttgaaggcgatg
cgcccagtcgactacccggacccgatcgtcgatcacgcgcacgagcgtgaggaagccttg
cgccggtacggcgagatcaaaggctga
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