Rhodococcus sp. DN22: RA302_24250
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Entry
RA302_24250 CDS
T09949
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_24250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoo02000
]
RA302_24250
Transporters [BR:
rhoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RA302_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVX69553
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All DBs
Position
5295714..5297312
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AA seq
532 aa
AA seq
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MKQRSYALLAAATGTVLALTACSTGGSSGSGGGEPVTDGTFKLALVADPGALNPLMTAAS
PAHQLARLSYDYLLHPDPDTGVTKPWLAEKWEETTTSASFTIRDGVTCNDGSALTAQTVA
DNVNFITNAANKSALRGVYAPATATATADPATRSVTVTTPEPSPFLLLNLARIPIMCEAG
LKDPTAANKTTFGSGMFQMTEAVANDHYSYVRRDGYNWGPDGTTSDTAGVPKNVVASIIT
NNSTAANQVLSGDLNAAAVSGPDQDRMNAANLDTVKQPAPAGEMFFNHSPGNPTSDPAVR
KALVQALNLDDLAEIFTAGRGTRSTTMVSIEPRACIYDSVAGNLPDFDTSAAAATLESAG
WKVGADGKRSKDGTPLRIRMVYETFGDATDAAADVAVNAWNDLGATVELTSGDSNKILDV
ALSGKDNTAWDVAWEPINVALPSMLVPFLSGPVPAAGMNFASISNPAYDAAVTKASGLTG
EDACAAWADAESEIIKANSAVPFADKITTLYFNNAGLAFGRNFIGSALRLYQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacggtcctacgcactactggctgcggcaactggcaccgttcttgccctgacc
gcgtgctcaacgggtggctcatcgggttcgggtgggggtgaacccgtcacggacggcacc
ttcaaattggctctcgtggccgaccccggcgctctgaatccgctgatgaccgccgcttcg
ccggcgcaccaactggcgcgtctgagctacgactatctgctccatccggatcccgatacc
ggcgtaaccaagccgtggctcgccgagaaatgggaagagacaaccacttccgcgtccttc
accattcgcgacggcgtcacctgtaacgacggatccgctctgactgcccagaccgtcgcc
gacaacgtcaatttcatcaccaacgcagcaaacaaatccgctctccgcggggtgtacgca
ccggcaactgcaactgccaccgccgacccggcgacccggagcgtaacggtcacaactccg
gaaccctctccgttcctgcttctcaacctggcgcgaataccgatcatgtgcgaggccggg
ttgaaggatccgacggcggcaaacaagacgaccttcgggtcgggcatgttccagatgacc
gaggcagtcgccaacgaccattactcctacgttcggcgcgacggatacaactggggaccg
gacggcactacctccgacactgccggtgtgcccaagaatgtcgtcgcatccatcatcacg
aacaacagcacagcggccaaccaggtgttgtccggtgatctgaatgccgctgccgtctcc
ggccccgatcaggaccgcatgaacgccgcgaacttggacaccgtcaagcagcctgctcca
gcgggcgagatgttcttcaaccacagtcccggcaatccgacgagcgatcctgccgttcgc
aaggcgctggtccaggctctcaatctcgacgacctcgccgagatcttcaccgccggccgc
ggaacccgatcgaccacgatggtgtccatcgaaccgcgggcctgcatctacgactctgtc
gccggaaacctaccggacttcgataccagtgcggccgcagcaactctcgagtctgcgggc
tggaaggtcggcgcggacggtaagcgcagcaaggacggcacaccactccgaattcggatg
gtctacgagacgttcggcgacgcgaccgatgctgctgccgacgtcgcggtcaacgcctgg
aacgacctgggcgccaccgttgaactcaccagtggagactcgaacaagattctcgatgtc
gcactcagcggcaaggacaacacggcgtgggatgtcgcgtgggagccgatcaacgtcgcg
ctgcccagcatgttggtccccttcctctccggtccggtacccgctgcgggaatgaacttt
gcgtcgatctccaacccggcctacgacgcagccgtcaccaaggcttccgggctgacgggc
gaggacgcttgtgccgcttgggcagacgctgagtccgagatcatcaaagcaaactcggcg
gtaccttttgccgacaagatcacgactctctacttcaacaatgcgggtcttgcattcggc
cgcaatttcatcggttcggccctgcgcctgtaccagtag
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