Rhodococcus sp. DN22: RA302_25240
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Entry
RA302_25240 CDS
T09949
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00061
Fatty acid biosynthesis
rhoo00071
Fatty acid degradation
rhoo01100
Metabolic pathways
rhoo01212
Fatty acid metabolism
rhoo02024
Quorum sensing
rhoo04146
Peroxisome
Module
rhoo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RA302_25240
00071 Fatty acid degradation
RA302_25240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RA302_25240
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_25240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoo01004
]
RA302_25240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoo04147
]
RA302_25240
Enzymes [BR:
rhoo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RA302_25240
Lipid biosynthesis proteins [BR:
rhoo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RA302_25240
Exosome [BR:
rhoo04147
]
Exosomal proteins
Exosomal proteins of breast milk
RA302_25240
Exosomal proteins of breast cancer cells
RA302_25240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WVX73686
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All DBs
Position
5504785..5506440
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AA seq
551 aa
AA seq
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MQYPDTTMAYWAPSMAALYGDRLAVVDGERTCTFRELGQRSAQFAGALRQAGVGVGDVVL
MHLGNCVEFLQAYYGCLQAGATVTLVNPLQPELGLRKQIEETSAVAAVTQSSQLHVLLAA
ASGTSVRTIVMVQDTEGALDTPESVVAFDSFIADLPTEFTPASVRSDDIAHIAFTGGTTG
VSKGVRVLHRNVVGNITQMCGWRTGHELEAGPEGLVTPRRIDGLDVLGPTPGTGATIVVS
PLFHAHSLLNTSFLLISGLTQVFAGRFEPGRMLELIEKHEATYLTGSPAMWHALSVHPDA
TVRNTDSVCVVSSGAAPIDSVTLAALRRAFPKALVVEGYGLTEATCVVTAAPLINGSEYR
QSSVGLPIFDTEIQIRDQLDRKTVLGENERGELWVRGPQVTDGYLGHPETTAEQFVDGWL
DTGDIAYLDSDGYLFICDRAKDMLIYKGYNVYPRELEEILVSHPAISTAAVVGREVGSNG
QEPVAFVVMIPGAEFDAEQIKAFVAEQVLPYKKIREVVEVELLPTSAAGKVLKTDLRSRL
LESVDQKGGSR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacccggataccaccatggcgtactgggcgcccagcatggcggcgctctacggt
gaccgcctcgccgtcgtggacggcgagcgtacgtgcaccttccgcgaactcggccagcgc
agtgcgcaattcgccggcgcactgcggcaagccggggtgggcgtcggcgacgtggtgttg
atgcacctcgggaactgcgtcgagttcctccaggcttactacggatgcctacaggccggg
gcgacagtcacattggtcaacccactgcagccagagctcggcctgcgcaagcagatcgag
gagacgtccgccgttgctgcagtgactcagagttcgcagctgcacgtactgctcgcggcc
gcttcaggaacctccgtgcgtacgatcgtgatggtccaggacaccgagggcgcgctcgac
acaccggagtcggtcgtcgcattcgactccttcatcgccgatctacccaccgaattcacc
cctgcctcggttcgtagcgacgacatcgcacacatcgcgttcaccggcggaaccaccgga
gtctccaaaggtgttcgtgttcttcaccgcaacgtcgtcggcaacatcacgcagatgtgt
ggatggagaaccggtcacgagttggaagcaggtcctgaaggtctcgtcacgcctcgacgc
atcgacggcctcgacgtgctcggtccgacgcccgggaccggggcgaccatcgtggtctcc
cctctcttccacgcacattcgttgctcaacacgtcgttcctgttgatttccggtctcacc
caggtatttgccggtcggttcgaacccggccggatgctcgagctgatcgaaaagcacgag
gccacctatctcaccgggtctcccgccatgtggcacgcactgtcggttcatcccgacgcc
acggtgcgcaacaccgacagcgtgtgcgtcgtgtcttcgggtgctgccccgatcgacagt
gtcacgctcgccgcactccgccgggcatttcccaaagcgctcgtcgtcgaaggctacggg
ctgaccgaggccacctgtgtggtcacggccgcaccgctgatcaacggctcggaatatcgg
cagagcagcgtcggcctcccgatcttcgacaccgaaatccagattcgcgatcagctcgac
cggaagaccgttctgggcgagaacgaacgcggcgaactgtgggtgcgtgggcctcaggtc
accgacggctatctcggacacccggaaaccaccgcagaacagttcgtcgacggttggttg
gacacgggagacatcgcgtacctggactcggacggatacctcttcatctgtgaccgggcc
aaggacatgctcatctacaaggggtacaacgtctatccgcgggaactcgaagagattctg
gtttcgcacccggcgatctcgactgctgcggttgtcggccgcgaagtggggagcaacggc
caggagcccgtagccttcgtggtgatgattccgggcgccgagttcgacgccgagcagatc
aaggcgttcgtcgccgagcaggtgctgccgtacaagaagattcgcgaagtcgtcgaggta
gaactccttccgacatcggctgccggtaaggtcctcaagaccgacctccgctcgagactt
ctcgaatccgtcgatcagaaaggcggttccaggtga
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