KEGG   Rhodococcus sp. DN22: RA302_25240
Entry
RA302_25240       CDS       T09949                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhoo  Rhodococcus sp. DN22
Pathway
rhoo00061  Fatty acid biosynthesis
rhoo00071  Fatty acid degradation
rhoo01100  Metabolic pathways
rhoo01212  Fatty acid metabolism
rhoo02024  Quorum sensing
rhoo04146  Peroxisome
Module
rhoo_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhoo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RA302_25240
   00071 Fatty acid degradation
    RA302_25240
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RA302_25240
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RA302_25240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhoo01004]
    RA302_25240
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoo04147]
    RA302_25240
Enzymes [BR:rhoo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RA302_25240
Lipid biosynthesis proteins [BR:rhoo01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RA302_25240
Exosome [BR:rhoo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RA302_25240
  Exosomal proteins of breast cancer cells
   RA302_25240
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: WVX73686
LinkDB
Position
5504785..5506440
AA seq 551 aa
MQYPDTTMAYWAPSMAALYGDRLAVVDGERTCTFRELGQRSAQFAGALRQAGVGVGDVVL
MHLGNCVEFLQAYYGCLQAGATVTLVNPLQPELGLRKQIEETSAVAAVTQSSQLHVLLAA
ASGTSVRTIVMVQDTEGALDTPESVVAFDSFIADLPTEFTPASVRSDDIAHIAFTGGTTG
VSKGVRVLHRNVVGNITQMCGWRTGHELEAGPEGLVTPRRIDGLDVLGPTPGTGATIVVS
PLFHAHSLLNTSFLLISGLTQVFAGRFEPGRMLELIEKHEATYLTGSPAMWHALSVHPDA
TVRNTDSVCVVSSGAAPIDSVTLAALRRAFPKALVVEGYGLTEATCVVTAAPLINGSEYR
QSSVGLPIFDTEIQIRDQLDRKTVLGENERGELWVRGPQVTDGYLGHPETTAEQFVDGWL
DTGDIAYLDSDGYLFICDRAKDMLIYKGYNVYPRELEEILVSHPAISTAAVVGREVGSNG
QEPVAFVVMIPGAEFDAEQIKAFVAEQVLPYKKIREVVEVELLPTSAAGKVLKTDLRSRL
LESVDQKGGSR
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgcaatacccggataccaccatggcgtactgggcgcccagcatggcggcgctctacggt
gaccgcctcgccgtcgtggacggcgagcgtacgtgcaccttccgcgaactcggccagcgc
agtgcgcaattcgccggcgcactgcggcaagccggggtgggcgtcggcgacgtggtgttg
atgcacctcgggaactgcgtcgagttcctccaggcttactacggatgcctacaggccggg
gcgacagtcacattggtcaacccactgcagccagagctcggcctgcgcaagcagatcgag
gagacgtccgccgttgctgcagtgactcagagttcgcagctgcacgtactgctcgcggcc
gcttcaggaacctccgtgcgtacgatcgtgatggtccaggacaccgagggcgcgctcgac
acaccggagtcggtcgtcgcattcgactccttcatcgccgatctacccaccgaattcacc
cctgcctcggttcgtagcgacgacatcgcacacatcgcgttcaccggcggaaccaccgga
gtctccaaaggtgttcgtgttcttcaccgcaacgtcgtcggcaacatcacgcagatgtgt
ggatggagaaccggtcacgagttggaagcaggtcctgaaggtctcgtcacgcctcgacgc
atcgacggcctcgacgtgctcggtccgacgcccgggaccggggcgaccatcgtggtctcc
cctctcttccacgcacattcgttgctcaacacgtcgttcctgttgatttccggtctcacc
caggtatttgccggtcggttcgaacccggccggatgctcgagctgatcgaaaagcacgag
gccacctatctcaccgggtctcccgccatgtggcacgcactgtcggttcatcccgacgcc
acggtgcgcaacaccgacagcgtgtgcgtcgtgtcttcgggtgctgccccgatcgacagt
gtcacgctcgccgcactccgccgggcatttcccaaagcgctcgtcgtcgaaggctacggg
ctgaccgaggccacctgtgtggtcacggccgcaccgctgatcaacggctcggaatatcgg
cagagcagcgtcggcctcccgatcttcgacaccgaaatccagattcgcgatcagctcgac
cggaagaccgttctgggcgagaacgaacgcggcgaactgtgggtgcgtgggcctcaggtc
accgacggctatctcggacacccggaaaccaccgcagaacagttcgtcgacggttggttg
gacacgggagacatcgcgtacctggactcggacggatacctcttcatctgtgaccgggcc
aaggacatgctcatctacaaggggtacaacgtctatccgcgggaactcgaagagattctg
gtttcgcacccggcgatctcgactgctgcggttgtcggccgcgaagtggggagcaacggc
caggagcccgtagccttcgtggtgatgattccgggcgccgagttcgacgccgagcagatc
aaggcgttcgtcgccgagcaggtgctgccgtacaagaagattcgcgaagtcgtcgaggta
gaactccttccgacatcggctgccggtaaggtcctcaagaccgacctccgctcgagactt
ctcgaatccgtcgatcagaaaggcggttccaggtga

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