KEGG   Rhodococcus sp. DN22: RA302_27315
Entry
RA302_27315       CDS       T09949                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhoo  Rhodococcus sp. DN22
Pathway
rhoo00061  Fatty acid biosynthesis
rhoo00071  Fatty acid degradation
rhoo01100  Metabolic pathways
rhoo01212  Fatty acid metabolism
rhoo02024  Quorum sensing
rhoo04146  Peroxisome
Module
rhoo_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhoo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RA302_27315
   00071 Fatty acid degradation
    RA302_27315
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RA302_27315
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RA302_27315
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhoo01004]
    RA302_27315
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoo04147]
    RA302_27315
Enzymes [BR:rhoo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RA302_27315
Lipid biosynthesis proteins [BR:rhoo01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RA302_27315
Exosome [BR:rhoo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RA302_27315
  Exosomal proteins of breast cancer cells
   RA302_27315
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: WVX70139
LinkDB
Position
complement(5918903..5920546)
AA seq 547 aa
MSSVLETSYFPADVSDPIEEQTVGGLLRECAADSPNLIAIREVVPTQSHSLSGAAETDRT
WTFAELLDEAEGCAHYLLSRFDCGDRITVWAPNVPEWMILQYGAALAGMVLVTANPALGA
EELAYVLSQSQSRGLFHTGKFRGGDMAAVASEAISISGEEVLAVNFEEWDRQVRGWAGER
GALPEVSPDDNAQIQYTSGTTGVPKGALLHHRGLVNNADFVSRRGRFPERGSVVSAMPLF
HTAGCGILVLGAAQRRMSIGLIQYFDPTAVLDAAERFHADVISGVPTMLIAMINDASFAS
RDFSACSVVVSGGSSVPPELVSTVESAFGAGFSIVYGQTEASPVITQTSPADTHEDKSET
VGLALPQVEVKISDVVTGDSVPLGEQGEICARGYLVMTEYFRNPEASADTVDKDGWLHTG
DLGTMDERGYVRVTGRLKDMIIRGGENIYPREVESVIFTHPKILDVAVVGVPDEVWGERV
VAVIRWKDESDQPTAAELVEFCTERLARHKAPKEWFSAEAFPLTGSGKIQKYRIASLVGE
GVYGVVN
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgagcagtgttctcgaaacgtcgtacttccccgctgacgtgtctgacccgatagaggag
caaacggtgggtgggctgctgcgagagtgcgccgcggactcgccgaatctgattgcaatc
agagaagtggttccgacgcaatcgcattcgctttccggggcggctgaaaccgatcgcacg
tggaccttcgcggagcttctcgacgaagcagaggggtgtgcgcactacctcttgtctcgg
ttcgactgtggagatcggatcactgtctgggctccgaacgttccggaatggatgattctg
caatacggcgccgcgctcgccgggatggttctggtgaccgccaatccggcgttgggtgcg
gaggaactcgcgtacgtcctgtcgcagtcccagtctcgggggctcttccacaccggaaag
ttccgcggtggcgatatggcagcggttgcatccgaggcgatttcgatttcgggagaagaa
gttctcgcagtcaacttcgaggagtgggatcgccaggttcgaggttgggcgggcgagcgg
ggcgctctgcccgaagtctcgcctgacgacaatgcgcagatccagtacacgtcgggaacc
accggggttcccaaaggtgctctgttgcatcaccgaggattggtcaacaatgccgatttc
gtgagtcggagaggccgattccctgagcggggttcggttgtgtcggccatgccgctgttc
cacaccgccgggtgcggcatcctggttctcggcgccgcgcagcgaagaatgtccatcggc
ctgatccagtacttcgatccgactgcggttctcgatgcggcggaacgctttcacgctgac
gtgatcagtggagtgccgacgatgctgatcgcgatgatcaacgacgccagcttcgcgagc
cgcgacttctcggcctgttcggtggtcgtatccggcgggtcgtcggtcccgcccgaactc
gtcagcacggtggagtcggccttcggggcggggttcagcatcgtctacggacaaaccgag
gccagccccgtcatcacacagaccagcccggccgacacccacgaagacaagtcggagacg
gtcggactcgcgttgccgcaggtcgaggtgaagatctccgacgtcgtgaccggggacagc
gtgccgctcggcgaacaaggcgagatctgcgcgcgcgggtacctcgtcatgaccgagtac
ttccgtaatccggaggcttcggccgacaccgtggacaaggacggttggttgcataccggc
gatttggggacgatggacgaacgtggatacgtccgggttaccggccgcctcaaggacatg
atcatccgcggcggtgagaacatctatccgcgtgaggtcgagtccgtgatcttcacacat
ccgaagattctcgacgtggcggtcgtgggtgtgcccgacgaggtgtggggtgagcgagtt
gtcgccgtcatccgctggaaggacgagtccgaccaaccgaccgccgccgagctggtcgag
ttctgcaccgagcgactggcgcgccacaaggcgcccaaggagtggttcagcgcggaggcg
ttcccactgacagggtcgggcaagatccagaaatatcgaattgcaagcctggtcggcgaa
ggcgtgtacggcgtcgtcaactga

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