KEGG   Rhodococcus sp. DN22: RA302_29035
Entry
RA302_29035       CDS       T09949                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhoo  Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:rhoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhoo02048]
    RA302_29035
Enzymes [BR:rhoo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RA302_29035
Prokaryotic defense system [BR:rhoo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RA302_29035
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII T1R_D3-like DEAD Formyl_trans_C GATase_4
Other DBs
NCBI-ProteinID: WVX70470
LinkDB
Position
complement(6293508..6296846)
AA seq 1112 aa
MEKPSMELLERLGWTCIDAFRETLGPQGTLGRDSQRDVVLTHRLRSAMRMLNPEHVPDTS
IDEAIEILTKDRSVMNRVRANREVHDLLRDGYQAEWTDLNGDQQIERLQYFDLINPSNND
LLAVQQMWIKGNLHSRRLDVALFVNGVPLVLMEFKEPNEPVKSAYDNNLTDNRDTIPQLF
IPNCFVLLSNGGQAKIGSTFSPWEFFNDWKVIDAHGTRGAIALETALRGTCDPAVLLDLF
ENFVAYMERVGGLIKVLARSHQYLGVNAAIENLRRARAEQDKRLGVFWHTQGSGKSLSML
WFTQKVLRQVAGKWTFVMVTDRKELDTQLHGEFAAAGAISPEARVHADSITHLRELLAAD
HRYVFTLIQKFQLSKGRGERQMPMLSDRSDVIVITDEAHRSQYDTLALNMRTALPNASMM
GFTGTPLIAGEEQATREQFGDYVSVYNFRDAIEDGATVPLYYENRIPELQLINENFSEEL
DALLEEAELDEDAEGQLARAFGTQYTLLTRPERLKTLARDLVTHFVGRGFSGKAMYVGLD
KAAAVRMHDLVKKAWAEHLDELQAQHDALPELERPWLASRIELMRTTDMAVVVSQSQNEL
KMLDELGLDIRPHRERMNREDLAEKFKDPADPLRLVFVCAMWMTGFDAPSVSTIYLDRPM
KNHTLMQTIARANRVFPEKDNGLIVDYVGVFRNLENALAIYGAAEAGESPIEIIDALSAE
LEAAVTEVFTFCSSVGADLKAMRDAEGFDHIAKRDAVVEALLVDEDVRVDFQQKARRVRK
LFKALLPNPDAATHQRNVAAIRVLAERIADVTRPAEADLGTVTDAVDALLDRSVGAEEYV
IRAAAEGTKSDPLIDLSQIDFEGLAAKLAGRKRAETDRMAQLLRQKAIGAATRNPTRYEL
VERIEQLISDYNAGSVNIDEYLKRLILLSETLTEEEERSAREGMTEAELAIFDLLTQPEP
ELTDVERETVKVSAKKLLEHLQDKLVQDWRRKVDVKNDVDSTIRRILDEGLPVEPYTPEV
FSSKVQRVFEHVLTAYGDNGESAYSQRPDISFPQKVDVDLTGPLDLNKIADDVVVRLRAD
PAFAVEVAAQIQARNLTSPWSPNISRSHGFLH
NT seq 3339 nt   +upstreamnt  +downstreamnt
gtggagaagccgagcatggaactattggagcggcttggctggacctgtatcgatgccttc
cgcgagacgctcggcccccagggaaccttagggcgggattcgcaacgcgacgtcgtcctg
actcaccggttgcggtcggcgatgcgcatgctcaaccctgagcacgtgcctgacacgtcg
atcgacgaggccatcgagatactcaccaaggaccgttcggtcatgaaccgagtgcgtgcc
aaccgtgaggtccacgacctgctgcgtgatggctatcaagccgagtggaccgacctcaat
ggcgaccagcagatcgaaaggctccagtacttcgacctgatcaacccttcgaacaacgac
ttgttggctgttcagcagatgtggatcaagggcaatctccatagccggcgccttgatgtt
gcgctgttcgtcaacggcgttccgttggtgttgatggagtttaaggaacccaatgagccg
gtcaagtcggcctacgacaataacctgaccgacaaccgcgacaccatcccccagctcttc
attccgaactgctttgttctgctgtccaacggcggacaagccaagatcgggtcgacgttc
tcgccgtgggagttcttcaatgactggaaggtcatcgacgctcacggcacgcgtggcgct
atcgctttggagacggctctgcgcggcacctgtgatccggcggtgctgctcgacttgttc
gagaacttcgtcgcgtacatggagcgcgtaggcggactgatcaaggtattggcacgctcg
catcagtacctgggagtcaacgcggcgatcgagaacctccgccgtgcgcgagcagaacaa
gataagcgtctcggtgtcttctggcacacccagggctcgggtaaatcgctgtcgatgttg
tggttcacgcagaaggtgctgcgccaggtggcgggcaagtggacgttcgtgatggtcacc
gaccgaaaggaactcgacacgcaattgcatggagagttcgccgcggcgggggcgatttcg
ccggaggctcgggtgcatgcggactccatcacgcacttgcgtgaattgctggctgccgat
caccggtacgtattcactctgattcagaaattccagctgtccaagggccgaggtgagcgg
cagatgccgatgctctcggaccggtccgacgtcattgtcatcaccgatgaggcgcaccgc
agccagtacgacacgctcgccctcaacatgcgcaccgcgctccctaacgcctcgatgatg
ggcttcaccggtactcctttgatcgcaggggaggaacaggccactcgcgagcagttcggc
gattacgtcagcgtctacaacttccgcgacgccattgaggatggagcgacggtcccgctg
tactacgagaaccgcatccccgagcttcagttgataaacgagaacttctccgaagaactc
gacgcactccttgaagaggccgagctcgacgaggacgccgagggccagctggcgcgagct
ttcggcacccagtacacgctcctcactcggccagagcggttgaagaccctcgccagagac
ctcgtcacacacttcgtgggccgcggatttagtggcaaggcaatgtatgtcggactcgac
aaagccgccgccgtgcgcatgcatgacctggtcaagaaggcctgggcagagcatctggac
gagttgcaggcccagcatgatgcgttgccagagttggagcggccctggctggcgtcgcgg
atcgaactgatgcgcaccaccgacatggcggttgtggtctcacagagccagaacgaactc
aaaatgctcgacgaactgggactcgatatccggccgcaccgtgagcggatgaaccgggaa
gacctcgctgagaagttcaaggatcccgccgatccgcttcgcttggtgttcgtctgtgcg
atgtggatgaccggtttcgacgcgccgagcgtttcaacgatctacctggatcggccgatg
aagaaccacacgctgatgcagaccatcgcccgcgccaaccgcgtattccctgagaaggac
aacggtctgattgtcgactacgtcggcgtcttccgaaatctggaaaatgctctagcgatc
tacggtgccgcagaggccggcgaatcgcctatcgagatcatcgatgcgctatctgccgag
ttggaagctgccgtcactgaggtgttcaccttctgcagttccgtcggtgcggatcttaag
gcgatgcgggatgcggaaggcttcgaccatatcgccaagcgggacgcagtggtggaagcg
ctgcttgtggacgaagatgtccgggttgattttcagcagaaggcccgacgggtacgcaag
ctcttcaaggcactgctgccgaacccggacgctgccacccaccaacgcaatgtcgctgcc
atccgggtactcgccgaacgcatcgcggacgtcacccggccggccgaagccgacctcggc
acagtcaccgatgcggtcgacgcgctgctcgaccgatccgtgggtgccgaggaatacgtc
atccgagcggccgccgaggggacaaaatccgatccgctgatcgacttgtcacagatcgac
tttgagggcttggcggcgaagctggcaggtcgtaagcgagccgagacagaccggatggcc
caactactgcgccagaaggccatcggagccgctacccgcaacccgacccggtacgagctt
gttgagcgtatagaacagctcatctcggactacaacgccggaagtgtgaacatcgacgag
tacctgaaacgcctgattctcttgtctgaaacgctgaccgaagaagaagagcgctcggcg
cgagaaggcatgaccgaagcggagctggcgatcttcgatctgctgacccagcccgaaccc
gagctgactgatgtggagcgcgagacggtcaaggtaagcgctaaaaaactcctagagcat
ctgcaggacaagctggtgcaggactggcgtcgcaaggtcgacgtcaagaatgacgtcgac
agcaccattcgacggatcctcgatgaagggctgccggtagagccttacacgcccgaggtt
ttcagctcaaaggttcagcgcgtctttgaacacgtccttaccgcatacggcgacaacggt
gagagtgcctacagtcaacgccccgatatcagtttccctcagaaagtggacgtcgacctc
acgggtccgctcgacttgaacaagatcgctgacgacgtggtggtgcgcctccgcgccgac
ccagcgttcgcagtcgaggtcgcagcgcagattcaggcacgaaacttaacttcaccgtgg
tcacccaacatatcgaggtcccacggttttctgcattga

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