Rhodococcus sp. P1Y: D8W71_01265
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Entry
D8W71_01265 CDS
T09477
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhop
Rhodococcus sp. P1Y
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_01265
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
D8W71_01265
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AYJ47189
UniProt:
A0A494SPS4
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Position
262510..262914
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AA seq
134 aa
AA seq
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MGRPVTDAATSARLSKQRRRDTKPEVALRQELHRRGLRYFVDRAPLKGMRRRADLVFPRR
KVAVFVDGCFWHSCPIHATKPRNNAQWWADKLDANVARDRDTDDRLAAQGWTVVRVWEHE
PASDAADRVVHALG
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagaccggtgaccgatgctgcgaccagtgcgcggctgagcaagcagcggcgacgc
gataccaagccagaagttgcacttcggcaggaactacaccgtcgaggcctgcgatatttc
gtcgatcgcgcaccgctgaaggggatgaggcgtcgggcagatctcgtgtttccccgacga
aaggtcgccgtgttcgtcgacggatgcttctggcacagttgcccgatccacgcgacgaag
ccgcgcaacaacgcccagtggtgggcggacaagttggatgccaacgtcgcccgggatcgc
gacaccgacgaccgtttggccgctcaaggctggaccgtcgtacgcgtgtgggagcacgaa
cctgcatccgatgcagccgacagggtcgtacacgcgctgggctga
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