Rhodococcus sp. P1Y: D8W71_03560
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Entry
D8W71_03560 CDS
T09477
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhop
Rhodococcus sp. P1Y
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhop03032
]
D8W71_03560 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_03560 (gyrB)
Enzymes [BR:
rhop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D8W71_03560 (gyrB)
DNA replication proteins [BR:
rhop03032
]
Prokaryotic type
DNA Topoisomerases
D8W71_03560 (gyrB)
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D8W71_03560 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AYJ51487
LinkDB
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Position
complement(751413..753452)
Genome browser
AA seq
679 aa
AA seq
DB search
MAAEKSGKTDNKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAM
AGYASTVDVTIHEDGSVEVKDDGRGIPVGTHSSGVPTVEVVMTQLHAGGKFDSDSYAVSG
GLHGVGISVVNALSTKVELQIARDGHRYTQTYNYAKPGPLETVGDTTDTGTIVRFWPDGK
IFETLDFSFDTVHRRLQEMAFLNKGLTINFVDERVADTDATEEELGETALAPKSAEEEEA
EAAAAKPTKARKRTYHYPDGLVDFVKHINAKKTPIHNSVVGFTGKGEGHEVEIAMQWNAG
YSESVHTFANTINTHEGGTHEEGFRTALTATVNKYAKEKKLVKEKDGNLTGDDIREGLAA
VISVRVGEPQFEGQTKTKLGNTEVRSFVLKACNEHLSHWFESNPADAKTIINKAVSSAQA
RMAARKARELVRRKSATDIGGLPGKLADCRSNDPAKSEIYIVEGDSAGGSAKSGRDSMFQ
AILPLRGKIINVEKARIDRVLKNNEVQSIITAFGTGIHDEFDITKLRYHKIVLMADADVD
GQHISTLLMTLLFRFMRPLIEHGHVYLAMPPLYKLKWSRGEPDFAYSDRERDGLLEAGIA
NKRKINVEDGVQRYKGLGEMNAKELWETTMDPSVRVLRLVTLDDAAAADELFSVLMGEDV
SARRSFIARNAKDVRFLDV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccgagaagtcaggtaagaccgacaacaaggattacggcgcttcgtcgatcacc
gtgctcgaagggctggaagcagtccgcaagaggcccggtatgtacatcgggtccaccggt
gagcgaggcctccaccacctgatctgggaagtcgtcgacaactctgtggacgaggccatg
gccggttacgcctccaccgtcgacgtcaccattcacgaggacggcagcgtcgaggtcaag
gacgacggccgaggaatccccgtcggcacgcactcctccggtgtacccaccgtcgaggtc
gtcatgacccagctgcacgcgggcggcaagttcgactccgactcgtacgccgtgtccggt
ggtcttcacggcgtcggcatctcggtagtcaacgccctctcgaccaaggtcgaactgcag
atcgcgcgcgacggacatcgctacacccagacgtacaactacgccaagcccgggccgctc
gaaaccgtcggtgacacgacggacaccggcacgatcgtccgtttctggccggacggcaag
atcttcgagactctcgacttcagcttcgataccgtgcatcgtcgcctccaggagatggcg
ttcctgaacaagggactgaccatcaacttcgtcgacgagcgagtcgcggacacggacgca
accgaggaggagctgggcgaaaccgccctcgcgcccaagtcggcggaagaagaagaggcg
gaagcagcggccgccaagcccacgaaggcgcgcaaacggacctaccactacccggacggc
ctggtcgacttcgtcaagcacatcaacgccaagaagacgccgatccacaactcggtcgtc
ggcttcaccggtaagggtgagggccacgaggtcgagatcgcgatgcagtggaacgccggc
tactcggaatcggtccacaccttcgccaacaccatcaacacgcacgagggcggcacccac
gaagagggtttccgcaccgcgctcactgcgacggtgaacaagtacgccaaagagaagaag
ctcgtcaaggagaaagacggcaacctcaccggcgacgacatccgtgagggactcgccgcg
gtcatctccgtgcgagtcggagaaccgcagttcgagggacagaccaagaccaagctcggc
aacaccgaagtgcgatcgttcgtcctcaaggcctgcaacgagcacctgtcgcattggttc
gagtcgaatccggccgacgccaagacgatcatcaacaaggccgtgtcgtccgcgcaagca
cggatggccgcccgcaaagcacgagaattggtgcggcgcaagagcgcaaccgatatcggc
ggcctaccgggcaagctggcagactgccgctcgaacgatcctgccaagtccgagatctac
atcgtggagggcgactccgcaggtggctcggcgaaatcgggccgcgactcgatgttccag
gcaattcttccgctccgcggaaagatcatcaacgtcgagaaagcacgcatcgaccgcgtc
ctcaagaacaacgaggtccagtcgatcatcaccgcgttcggcaccggtattcacgacgag
ttcgacatcaccaagctgcgctaccacaagatcgtcctgatggccgacgccgacgtcgac
ggccagcacatctcgacgctgctcatgacattgctgttccgcttcatgcggccgctcatc
gaacacggtcacgtgtacctggccatgccgccgttgtacaagctgaagtggagccggggc
gaacccgacttcgcgtactccgatcgtgagcgcgacggactactcgaagccggcatcgcc
aacaagcgcaagatcaatgtcgaggacggtgtccagcgctacaaaggcctcggcgagatg
aacgccaaggaactgtgggaaaccacgatggacccgtcggtacgcgttctgcggttggtc
accctcgacgatgcagctgctgcagacgaactgttcagcgtgttgatgggtgaagacgtc
agtgcccgacgtagtttcatcgcgcgcaacgccaaagacgttcgtttcttggatgtgtga
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