Rhodococcus sp. P1Y: D8W71_10500
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Entry
D8W71_10500 CDS
T09477
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03420
Nucleotide excision repair
rhop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D8W71_10500 (pcrA)
03430 Mismatch repair
D8W71_10500 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_10500 (pcrA)
Enzymes [BR:
rhop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D8W71_10500 (pcrA)
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8W71_10500 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D8W71_10500 (pcrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
PMC2NT
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AYJ48691
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All DBs
Position
2244942..2247389
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AA seq
815 aa
AA seq
DB search
MNTNLTAVPAPGKSKSEALLEGLNPQQREAVMHSGSPLLIVAGAGSGKTAVLTRRIAYLL
AERGVMPGQVLAITFTNKAAAEMRERVAGLVGPRANSMWVSTFHSSCVRILRNQASLLPG
LNSNFSIYDADDSRRLLTMISKDLQIDTKKFSARLLSTAISNLKNELIGPDDAASDAEKQ
MVELPKLVAKVYAIYQQRLRAANAMDFDDLIGETVGLLQAFPQVAEYYRRRFRHVLVDEY
QDTNHAQYMLVRELVGREDSDGALQGTISPGELCVVGDADQSIYAFRGATIRNIEEFERD
YPDARTILLEQNYRSTQNILSAANSVISRNTGRRDKKLWTDSGEGELIVGYVADNEHDEA
SFVASEIDRLVDNHDVRYDEVAVFYRTNNSSRALEEIFIRLGLPYKVVGGVRFYERKEVR
DMVAYMRVLSNEDDTVSMRRILNTPRRGIGDRAEACVAVHAEQRDISFSKALHDAAAGKV
ALLNSRSQKLIGQFLEMLDELRAVLGSTDDDGNDIGDIGEVVEAVLDRTGYRAELEASSD
PQDGARLDNLNELVSVAREFTSEARNLAAVEAESEVEVEVEEGTPEPGSLAAFLERVSLV
ADTDQIPDSGTGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAY
VGITRARHRLYVTRAIMRSAWGQPINNPESRFLQEIPQSLIDWKREDPGVGARPRSGGFG
GGGFGGGGGYGGGGFGGGGFGERRGQQSTPSFGSARARNNTLVLAVGDRVNHDKYGLGTV
LESTGSGTSAMVLVDFGTSGRVKMMLIGGVPMTKL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaacctcactgctgtacccgcgcccggaaagtccaagtccgaagccctgctg
gagggtctcaacccccagcagcgcgaggctgtgatgcactcgggatcgccgctcctcatc
gtggccggcgcggggtcgggcaagacggctgttctgacacgtcgtattgcgtacctgttg
gccgagcgcggggtcatgccgggccaggttctggccatcacgttcaccaacaaggccgct
gcggagatgcgcgagcgcgtcgccggcctcgtcggtccccgggccaacagcatgtgggtc
tcgacgttccactcgagctgcgtacgcatcctccgcaaccaggcttcgttgctgcccggg
ctcaactcgaacttctcgatctacgacgccgacgactcacgccgcctgctgacgatgatc
tccaaagacctgcagatcgacaccaagaagttctccgcgcgtctgctgtcgactgccatc
tcgaacctcaagaacgagctgatcgggccggacgatgcggcgtcggacgccgagaagcag
atggtcgagctgcccaagctcgtggcaaaggtgtacgccatctaccagcagcggttacgc
gcggccaatgcaatggacttcgacgacctgatcggcgagaccgtcgggctgctccaagcg
tttccgcaggttgccgagtactaccggcgccggttccggcacgtgctcgtcgacgagtat
caggacaccaaccacgcgcagtacatgttggtccgggagttggtcggccgtgaggattcg
gacggggcgctccagggcaccatctcaccgggtgagctctgcgtggtcggtgacgcggac
cagtccatctacgcgttccgcggcgcgaccatccgcaatatcgaagagttcgaacgtgac
tacccggacgctcggaccattctgctcgagcagaactatcggtcgacacagaacatcctc
tccgccgccaactcggtcatctcgcgcaacaccggcagacgcgacaagaagctctggacg
gactcgggtgagggcgagctcatcgtcggatacgtcgccgacaacgagcacgacgaggcg
tcgttcgtcgcgtcggaaatcgatcggctcgtcgacaaccacgacgtgcggtacgacgag
gtggcggtcttctatcgcaccaacaactcgtcgcgtgcactcgaagagatattcatcagg
ctcggattgccctacaaggtcgtgggcggggtgcgcttctacgagcgcaaggaagtccgc
gacatggtcgcctacatgagagtgctgtccaacgaggacgacacggtgagcatgcgccgc
attctcaacacgccgcggcgggggatcggcgatcgcgccgaagcatgcgtagcggtgcac
gccgaacaacgcgacatcagcttctccaaggccttgcacgacgccgccgcaggcaaggtg
gctctgctcaactcgcgttcgcagaagctgatcggccagttcctcgaaatgctcgacgag
ctccgtgcggttctgggcagcacggatgacgacggcaacgacatcggggacatcggggag
gtcgtcgaagccgtcctcgatcgcaccggctatcgggcggagctcgaagccagcagtgac
ccgcaggacggtgcgcggctcgacaacctcaacgaactggtcagtgtcgcaagagaattc
acttccgaagcacgcaacctcgctgctgtggaggcggaatccgaggtcgaggtcgaagtg
gaagaggggacaccggagccaggttcgctcgcagcattcctcgaacgggtctcgctcgtc
gccgacaccgaccaaatccccgactcgggcacgggcgtcgtgacgctgatgacgctgcac
accgccaagggtctggagtttccggtggtgttcgtgaccggttgggaggacgggcaattc
ccgcacatgcgtgcgctgggcgatccggccgaactgtcggaggagcgcaggctcgcatac
gtggggatcacccgcgcacgccaccgtctgtacgtcacacgcgcaatcatgcggtccgcg
tgggggcagcccatcaacaatcccgagtcacgattcctgcaagagattccgcagtcgctg
atcgactggaagcgtgaagacccaggcgtcggtgcgagaccgagatccggcggcttcggt
ggtggtggtttcggcggcggcggtggctatggcggtggtggtttcggcggtggtggtttc
ggagagcgtcgtgggcagcaatcgacacctagcttcgggtccgcacgcgcgcgcaacaac
actttggtgctcgcagtgggcgaccgcgtcaatcacgacaagtacggcctcggaacggtg
ttggagtccacgggaagtgggacctctgccatggtgctcgtggacttcggtacgtccggc
cgggtgaagatgatgctcatcggcggagttccgatgaccaagctctga
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