Rhodococcus sp. P1Y: D8W71_14200
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Entry
D8W71_14200 CDS
T09477
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03420
Nucleotide excision repair
rhop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D8W71_14200
03430 Mismatch repair
D8W71_14200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_14200
Enzymes [BR:
rhop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D8W71_14200
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8W71_14200
MMR (mismatch excision repair)
Other MMR factors
D8W71_14200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AYJ51828
UniProt:
A0A494SZ59
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All DBs
Position
3077548..3081036
Genome browser
AA seq
1162 aa
AA seq
DB search
MQTLPGAVQLSGPRDRKAGDRELNTTTVTGRRRTGPEREPQNLEPQTLEPRIDPVELSRA
LGQKHPPTDEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWMVANQFVDPDSVLGLTFT
RKAAQQLTSRIRARLARLAGSDVVRALDPSLALRERILSGEPEVSTYHSYAGRLLTEHGL
LLPIEPSASLLSETELWQLAHRVVSTWDGDLDTDRNPTSITEAVLALSGQLAEHLVDPDD
LRVAHSDLDQLVHTLGPGPGQRGGPTKSLLDMIDAQHKRVALLPLVERLAQTLRREGALD
FGSQMSLAARVAADHHDVGRAERDRFRLVLLDEYQDTGHAQRVLLSSLFGGGTDPSLALT
AVGDPMQSIYGWRGASAANLPRFATDFPQAGGAPAPRLELLTSWRNPPEALALANHVTAP
LKEVGVPVPTLRARPGATAGDIRMAMTATVLGEREWVADRIAAEFRAASDEDRPPPTAAV
LVRRNADAEPIADALRARGLPVEVVGLGGLLHIPEVADVIAMLRLVADPMAGSAAMRVLT
GSRWQIGAADLRALSRRSRELGIGGTHGTAGRVDDAEALDAALESSLPGEHAEDAGLADA
IADPGAAERYSARGYERITALAAELHSLRDRIGQPLTELVADIERSMGIGIEAQARTPAS
VVGAVGREHLDEFAVVVADYADNPTATVTGFLAFLAAADTVENGLAPGEVEVAPHRVQVL
TVHSAKGLEWEVVAVPHVSKGVFPSSTASSTWLGAMAELPPTLRGDRSVQDAEGRMSEGV
PVLDLDGVYNRKDLQEAIDRHKDALARRRLAEDRRLFYVALTRTERALFLSGHHWDETSA
KPRGPSEFLGEIKALVDATAARGDGPVAVVDEWATAPEDGTDNPLAAEPHSASWPRDPLG
ARRASVELGAQAVLNMLDRPDDASDDDPENWAADVDALLAEREERSRREVNVALPENLSV
SQLVDLAADPDALASRLRRPLPFPPNPLARRGTAFHAWIERRFGATRLLDLDELPGSADT
GASADVDLETLQQAFLASDWSLRSPIEVEVPFETAVAGTVLRGRIDAVFADSDGGWTVID
WKTGKEPSATEEKSVVMQLAAYRIAWAELMSASSPQPIPLERVRAAFHYVRSGRTIAPVD
LPDAQALAALIDGTAEVEFDQP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ctgcagacattgcccggtgcagtccagttgtccggcccacgagacaggaaggcaggtgac
cgagagttgaataccaccacggtcaccggtcgacgccgtactggccccgaacgcgaaccc
cagaatctcgaaccccagactctcgaaccccggatcgatcctgtcgagctgtctcgcgcg
ctggggcagaagcacccgcccacggacgagcaggcagcggtgatcgctgccccactcggc
ccgacactcgtcgttgcaggcgccggtgcgggaaagaccgaaacgatggcggcgcgcgtg
gtctggatggtagcgaaccagttcgtcgatccggacagcgttctcggactgacgttcacg
cgcaaggccgctcagcaacttacgtcccggatcagggcgaggttggcgcgcctggcaggc
tccgatgtggtgcgtgctctcgatccgagcttggctctacgcgaacggattctgagcggc
gagccggaggtgagtacctaccactcgtacgcgggcaggctgctcaccgaacatgggttg
cttctgccgatcgaaccgtccgcgtccttgctgtccgaaaccgagctgtggcaattggct
caccgcgtcgtcagcacatgggacggtgatctcgacaccgaccgcaatcccacgtccatc
accgaggcggtcctcgctctgtccggtcagctcgccgagcatctggtcgatccggacgat
ctgcgagtggctcatagcgacctcgatcaactggtgcacacgttgggtcccggacccgga
cagcgcgggggaccgaccaagtcgttgctcgacatgatcgacgcgcagcacaaacgagtt
gctttgctgcccttggtcgagcgtctcgctcagacactgcggcgtgaaggtgcgctcgat
ttcgggagccagatgtctctggcggcccgagtcgcggccgaccatcacgacgtcgggcgc
gccgagcgtgaccgtttcaggctcgttcttctcgacgagtatcaggacaccgggcatgcg
cagcgggttctgttgtcgtccttgttcgggggtggtaccgatccatcgctggcgctcaca
gcggtaggcgatccgatgcagtccatctacgggtggcgcggcgcatcggcggcgaatctg
ccgcgattcgccacggactttccgcaggcaggcggtgcgcccgcgccccggctcgaactg
ctgacgagttggcgcaacccacccgaggcgctcgccctcgccaaccacgtcactgcaccg
ctcaaggaagtaggcgtgccggtgccgaccctgcgtgctcgccctggtgcaacggccggc
gatatccgaatggcaatgacggccacggtgctcggtgaacgagagtgggttgccgatcga
atcgcagcggagttccgtgcggcgtcggacgaggaccggccgccgccgaccgcggccgtg
ctcgtacgacgcaacgccgacgcggagccgatcgcagacgccctgcgggccagaggtcta
ccggtcgaggtcgtcggactcggcgggctcctgcacatccctgaggtcgccgatgtcatc
gcgatgcttcgactggtggccgacccgatggcaggcagcgcggcaatgcgtgttctgacc
gggtcgcggtggcagatcggggcggcggacctcagagcactctcccgtaggtcgcgtgag
ctggggatcgggggcacacacggaactgcaggacgagtcgatgatgcggaggcgctcgac
gccgcgctggagagttcgttacccggcgagcacgccgaggacgcgggcctggccgacgcc
atcgcggaccctggtgcagccgagcgttattcggcgcgcgggtatgaacgaatcactgcc
ctcgccgcggaacttcattcgctccgagaccggatcggacagccgctgaccgagttggtc
gcggacatcgagcgatccatgggaatcggaatcgaggcgcaggcgcgaacaccagcgtcc
gtcgtcggcgcagtgggacgcgagcacctcgacgaattcgcggtcgtcgtcgccgattac
gccgacaacccgaccgctacggtcaccggtttcctggcctttctcgcggcagccgacacg
gtggagaacgggctcgctcccggtgaggtcgaggtggcgccgcaccgagtgcaggtactc
accgtgcactccgcgaagggtctcgaatgggaagtcgtcgccgtcccgcacgtctcgaaa
ggcgtctttccgtcgtcgacagcgtcctcgacgtggttgggcgcgatggcggaacttcct
ccgactttgcgtggcgatcgatccgtccaggacgcggaaggccgtatgtccgagggtgtt
ccggttctggacctcgacggggtttacaacagaaaggatctgcaagaggccatcgatcgt
cacaaggatgccttggcgagacgtaggctcgccgaggaccggcgactgttctatgttgcg
ctgacgcggaccgaacgcgcactcttcctgtcggggcaccactgggacgagaccagtgcc
aaaccccgagggccgtcggaatttctgggggaaatcaaggcactggtagatgccactgcg
gcacgtggcgacggcccggtcgccgtcgtggacgaatgggctaccgcgccggaggacgga
accgacaacccgcttgccgccgagccgcactcggcatcgtggccgcgcgacccgctcggt
gccaggcgggcgtccgtcgaactcggggcgcaggccgtattgaacatgctcgaccgaccg
gacgacgcatcggacgacgatccggagaactgggctgccgacgtcgacgcattgcttgcc
gaacgagaagagcggtcacgtcgagaggtgaatgtcgctctgccggaaaacctctcggtg
agtcaactcgtcgatctcgccgcagatcccgatgcattggcgtcaaggcttcgtcgtccg
ttgccgttcccgccgaacccgttggcgcgtcgaggaaccgcattccacgcgtggatcgag
cgacgcttcggagccacccggttgttggacctggacgaactgcctggatccgcggacacc
ggcgcgagtgccgacgtcgatctcgagacgctgcagcaggcgttccttgcttcggattgg
tcactacgcagtccgatcgaggtcgaggtgccgttcgagaccgctgtggcaggcacggta
ctgcgaggtcgaatcgatgcggtgttcgccgactccgacggcggttggacggtcatcgac
tggaagacaggcaaggaaccctctgcgacggaggagaagtccgtcgtgatgcagctcgcg
gcctatcggatcgcgtgggcggaattgatgtcggcctcgtccccccagccgattccactc
gagcgggttcgggccgcgttccactacgtgcggagcgggcgaaccattgcacccgtagat
ctacccgacgcgcaggcgctcgctgcgttgatcgacggcaccgcagaagtcgagttcgac
caaccgtga
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integrated database retrieval system
