Rhodococcus sp. P1Y: D8W71_14790
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Entry
D8W71_14790 CDS
T09477
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhop
Rhodococcus sp. P1Y
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhop03032
]
D8W71_14790
03036 Chromosome and associated proteins [BR:
rhop03036
]
D8W71_14790
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_14790
DNA replication proteins [BR:
rhop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D8W71_14790
Chromosome and associated proteins [BR:
rhop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
D8W71_14790
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
D8W71_14790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AYJ49377
LinkDB
All DBs
Position
3201276..3201989
Genome browser
AA seq
237 aa
AA seq
DB search
MNKAELIDALTEKLGSDRRSATEAVENIVDTIVRAVHRGESVTITGFGVFEQRRRAARVA
RNPRTGETVRVKPTNVPAFRPGAQFKAVIAGGQKLPATGPAVKRGSSAAPAKKTAAAKKT
AAKKAAVKTTARKTTAAAKKAAPAKTTARKAAPAKTVAAKKAAPAKTTARKTVAKKAPAK
AAAKKTTTAAAAKKAPAKTAAKKTAATTTAAAKKAPAKTAAKKTAAKKAPAKRAARK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctgattgacgccctgaccgagaagttggggtctgacaggaggagc
gccacagaggctgtcgagaacatcgtcgacaccatcgtgcgcgccgttcaccgtggcgag
agtgtcaccatcaccggattcggtgtattcgaacagcgtcggcgtgcggcacgtgttgct
cgcaacccacgcaccggcgagaccgtgcgcgtcaagccgaccaacgtgccggccttccgc
ccgggcgctcagttcaaggctgtaatcgcgggcggccagaagcttcccgccaccggcccg
gccgtcaagcgtggatcctcggcggctccggccaagaagaccgcagctgccaagaagacc
gcagcgaagaaggctgcagtcaagacgacagctcgcaagaccaccgcggcagcgaagaag
gcggctcccgcaaagacgactgcccgcaaggcagctcccgcgaagaccgtggcagcgaag
aaggcagctcccgccaagacgacggctcgtaagaccgtcgcgaagaaggctccggcaaag
gccgcagccaagaagactacgactgccgcagcggccaagaaggcccccgcgaagaccgca
gccaagaagaccgcagcgaccacgaccgctgcagccaagaaggctccggccaagaccgca
gccaagaagaccgcagcgaagaaggctccggccaagcgcgctgcacgcaagtag
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