Rhodococcus sp. P1Y: D8W71_17100
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Entry
D8W71_17100 CDS
T09477
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rhop
Rhodococcus sp. P1Y
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhop03019
]
D8W71_17100
Enzymes [BR:
rhop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D8W71_17100
Messenger RNA biogenesis [BR:
rhop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D8W71_17100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYJ49739
LinkDB
All DBs
Position
3690231..3692954
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AA seq
907 aa
AA seq
DB search
MTVSTSQLQRFAGELSFPLDRFQVDACTALEAGHGVLVCAPTGAGKTIIGEFAVHLALAA
GRKCFYTTPIKALSNQKFAELTARYGRETVGLLTGDSSINPDAPIVIMTTEVLRNMLYAS
SDALRGLSHVVMDEVHYLADRFRGAVWEEVILHLSQDVRLVSLSATVSNAEEFGAWMETV
RGDTTVVVDENRPVPLSQHIMVGRRLFDLFDSRAQTGSGAAKLVVDKDLVRHVKQRQSLD
YADRWQPPHGRGRSRGGHGTSVANRPLPRPEVIAKLDEEGLLPAITFIFSRAGCDGALTQ
CLRSRLVLTTPEQTEEIRYIVDKHTSELPREDLEVLGYWEWREALERGLAAHHAGMLPVF
RHTVEELFVKGLVRAVFATETLALGINMPARTVVLEKLVKYNGETHAELTPGEYTQLTGR
AGRRGIDVEGHAVVLWQPGTEPTEVAGLASTRTFPLRSSFRPGYNMSINLVEQFGAAESR
ALLERSFAQFQADRSVVGLVRGIERNSQTLTQLMARLGGVDGEYFEYAKLRERLKDREKT
LERQGRQDRRDRAVESLRGLSRGDVVSVPSGRRSGLAVVLEPDDDRVDPRPLVLTEDAWA
GRLSAADFPSAADPLGRMRLPRFVDHRTARTRRDLSAALRSTGMSMPSDRKRRKSTAADD
RELATLRRSIKSHPVHARPDRDELGRVGERYNKLARDTETMRQKVSATTNSLARTFDRIL
SLLAERDYISSGRTPSVTENGARLSRIYSESDLLVAECLRQGLWRGLAPAELAAVVSAVV
FESRQEGDSTPQGPTGPIRHALAETVRVWQELQADEVRHKLPPTREPDMGFVKAVYRWAS
NHTLAEALVVAGDNGKALSGGDFVRWCRQVIDLLDQIRLASPDPQLSKTASRAVAALRRG
VVAVDAA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtgtccacatcgcaattacagcgatttgccggagagctcagttttccgctcgac
agatttcaggtcgatgcctgtaccgcgttggaggccggccatggcgtcctggtgtgcgct
ccgaccggcgcaggcaaaacgatcatcggcgagttcgcagtgcaccttgcgttggctgct
ggacgaaaatgcttttacaccacaccgatcaaagcgctgagcaatcagaaattcgcggaa
ctcactgctcggtacggtcgcgagacggtcgggttgctcaccggcgactcgagcatcaac
cccgacgcccccatcgtcatcatgacgaccgaggttctgcgcaacatgctctatgcgtcg
tcggatgctctacgtggcctgtcccatgtcgtgatggacgaggtccactacctcgcggac
cgattccgcggcgcagtgtgggaagaagtcattcttcatctctcgcaggatgttcgactc
gtcagcctgtcggcgacggtcagcaacgccgaggaattcggcgcctggatggagactgtc
cgcggtgacaccaccgtggtggtcgacgaaaatcgtccagtgcccctttcccagcacatc
atggtcggccgcagactgttcgacctcttcgacagccgcgcccagacagggagcggcgct
gcgaaactcgtggtcgacaaggacctggtgcgtcacgtcaaacagcggcaatcgctggac
tacgccgaccgatggcaaccaccgcacgggcgaggccgtagtcggggcggacacggaacg
agtgtggcgaacaggcccctgcccaggccggaagtcatcgccaaactcgacgaggaaggc
ttgctcccggcaatcacgttcatcttcagccgcgccgggtgcgacggtgctctcacgcaa
tgcctgcggtctcgtctggttctgacgactccggaacagaccgaagagattcgctacatc
gtggacaagcacacctccgagttgccacgagaggacctggaagttctcggctactgggaa
tggcgcgaagctctcgaacgcggtctcgccgcacaccacgccggcatgttgccggtcttc
cgtcacaccgtcgaagaactcttcgtcaagggtttggtgcgtgcggtgttcgcgacggag
acacttgcgctcggtatcaacatgcccgctcgaactgtggtcttggaaaaactggtcaag
tacaacggcgagacccacgccgagctgacgccgggcgaatacacacagttgaccgggcgg
gcaggtcgacgaggaatcgacgtcgaaggtcacgccgtcgtgctgtggcagccgggaacc
gagccgaccgaggtcgctggcctcgcgtccacgcgtacatttccactgcgaagctcgttc
cgccccgggtacaacatgtcgatcaatctcgtcgaacagttcggggcggccgaatcgcga
gccctgctggagcggtcgttcgcgcaattccaggcagaccgatcggtggtcggtctcgtg
cgaggaatcgaacgaaacagccagacgctcacacagctgatggcccgtctgggcggcgtc
gacggcgaatacttcgagtacgccaagctgcgtgaacgcctcaaggaccgtgagaagacg
ctggaacgccaaggaaggcaggatcgacgcgaccgagccgtggagtcgcttcgtggcctc
tcgcgcggtgatgtcgtgtccgtccccagtggcagaaggagcggcctcgccgtcgttctc
gaacccgacgacgaccgagtggatccacgtcccctcgtgctgaccgaagatgcgtgggca
ggccggctgtccgccgccgatttcccatctgctgctgatccgttggggcgcatgcgattg
cctcggttcgtcgaccacaggactgcacgcacgcgccgcgacctgtcggcagccttgcga
tccaccggtatgtcgatgccctccgatcggaaacgacgcaagtccacggcggccgacgac
cgagaactggcgaccctgcgtcgcagcatcaagtcacacccagtgcacgcacgtccggac
cgcgacgaactggggcgcgtgggggagcgatacaacaagctcgcccgcgacaccgagacg
atgcggcagaaggtatccgcgaccacgaactcgctcgcccgcacattcgatcggatcctg
tcgttgctggccgaacgtgattacatcagctccggacgtacaccgtcggtgaccgagaac
ggcgccaggttgagccggatctactccgaatccgaccttctcgtcgccgagtgccttcgc
caggggctgtggcgtggtctcgcgcctgccgagctcgccgccgtcgtatccgcagtggtg
ttcgagtcgaggcaggaaggagactcgacaccgcagggaccgaccgggccgattcgtcac
gcactggccgagaccgttcgcgtctggcaagaattgcaagccgacgaagttcggcacaag
cttcctcccacacgggaaccggacatggggttcgtcaaggctgtgtatcgctgggcgagc
aaccacacgcttgccgaggcgctggtcgtcgccggggacaacggcaaggccttgtccggc
ggagatttcgttcggtggtgccgtcaggtcatagacctgctcgatcagatacgtctggca
tcgcccgatccgcagttgtccaagacggcgtcgcgggccgtggccgcgcttcgacgagga
gttgtagcagtcgacgctgcatga
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