Rhodococcus sp. P1Y: D8W71_18630
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Entry
D8W71_18630 CDS
T09477
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03030
DNA replication
rhop03430
Mismatch repair
rhop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D8W71_18630
03430 Mismatch repair
D8W71_18630
03440 Homologous recombination
D8W71_18630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhop03032
]
D8W71_18630
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_18630
Enzymes [BR:
rhop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D8W71_18630
DNA replication proteins [BR:
rhop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D8W71_18630
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D8W71_18630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AYJ49979
LinkDB
All DBs
Position
complement(4050167..4053703)
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKIAPLFAEANRLGMTAVGMTDHGNMYGASEFYNEAKKAG
IKPIIGIEAYIAPESRFNKKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGVRNLFKLS
SLASIEGQLGKWARMDEEIIASHAEGIIATTGCPSGEVQTRLRLGQDREALEAAAKWREI
WGPDNFFLELMDHGLSIERRVREGLLDIGQKLSIPPLATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRELWDDQVPGACDSTLLIAERVQPYDEVWEHRDR
MPIFPVPEGHTQGTWLEHEVMTGLDRRFPGGPTEEYLSRAKYEIGVILEMGFPAYFLVVG
DLINHAKTVGIRVGPGRGSAAGSLVAYAMGITNIDPLPHGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFNIADQITKAL
PPPIMAKDISVAGITDPAHERYKEATEVRALIDSNPDVATIYKTAKGLEGLIRNAGVHAC
AVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIDNIK
ANRGIDIDLDSLPLDDPATFELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNSHNDYADRKNGRQEVKPIHAELEEPLKVILGQTYGLVVYQEQIMQLAQKVA
GYSLGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNSFSEAAIKALWDTVLPFAGYAFNK
SHSAGYGLVSYWTAYLKANYPSEYMAGLLTSVSDDKDKSAIYLADCRKLGITVLPPDVNE
SELNFASVGKDIRFGLGAVRNVGTNVVASIIRAREEKSKYTDFSDYLNKIDATACSKKVT
ESLIKSGAFDSLEHPRKGLMLIHADAIDSVMGTKKAEAIGQFDLFGGEDADESISSVFNV
RVPDEEWESKHRLALEREMLGLYVSGHPLLGVEHMLAAQSDTNIPAILEGDIKDGTQVTI
GGILASVNRRINKNGLTWASAQLEDLVGGIEVLFFPQSYSVFGADVTEDSVVLVKGRVSV
RDDRISLIANDLAVPDLSAVGVARPLAVSLPTRQCTADKVGALKKILMSHPGTSDVHLRL
VSGDKVTAMKLDDSLRVTPTSALMGDLKALLGPGCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgttcatctgcacaaccacaccgagtactcgatgctcgacggcgcg
gccaagattgcaccgctgttcgcggaggcgaatcggttgggaatgaccgctgtcggtatg
acagatcacggcaacatgtacggagcgagcgagttctacaacgaagccaagaaggcaggc
atcaagccgatcatcggcatcgaggcctacatagcccccgagtcacgattcaacaagaag
cgtgttctgtggggcgaccgaagtcagaagtccgacgacgtttccggtagcggcgcgtac
acccacatgaccatggtcgccgagaacgcgacgggcgtcaggaatttgttcaaactctcg
tccctggcatccatcgagggccagctcggcaagtgggcacggatggacgaggagatcatc
gcctcgcatgccgaaggcattatcgccaccaccggctgcccttccggcgaagttcagacg
cgactgcgcctcggacaggaccgcgaggccctcgaagccgcagccaagtggcgcgagatc
tggggaccggacaacttctttctcgagctgatggatcatggattgtcgatcgagcgacgt
gtccgtgaaggcctgctcgacatcggacagaagctctcgattccgcctctcgcgaccaac
gactgccactacgtcaccaaggatgcagcggagaaccacgaagcgctgctgtgcattcag
accggtaagacactcagtgatccgaccaggttcaagttcgacggtgacggttactacctg
aagtctgccgccgaaatgcgcgagctgtgggacgaccaggtcccgggagcctgcgacagc
actctgctgatcgccgaacgcgttcagccctacgacgaggtctgggagcaccgcgaccgg
atgccgatctttccggtgcccgagggacacactcagggcacgtggctcgaacacgaggtc
atgaccgggctcgaccgacggtttccgggcggaccgaccgaggagtacctctcgcgcgcg
aagtacgagatcggcgtcatcctcgaaatgggattccccgcctacttccttgtggtcggc
gacctcatcaaccacgcgaagactgtcggaattcgcgtgggaccgggccgtggatcggct
gcaggttcgctcgtcgcatacgcgatgggcatcaccaacatcgacccgctgccacacggc
ctgctgttcgagcgatttctcaaccccgagcgtgtgtcgatgcccgatatcgatatcgac
ttcgacgaccggcgccgcggagagatggttcgctacgccaccgagaagtggggcagcgac
cgtgtcgcacaggtcatcaccttcggaaccatcaagaccaaggccgccatcaaggactct
gcgcgtgtgcagttcgggcagccggggttcaacatcgcggaccagataaccaaggcgttg
ccgccgcccatcatggccaaggacatctcggtcgcgggtatcaccgatcccgcgcacgag
cggtacaaggaagcgaccgaggttcgtgcgctgatcgattccaacccggacgtggcgacc
atctacaagacggcgaagggtctggagggtctgattcgtaatgcgggcgtccacgcctgc
gcggtgatcatgtcctccgagcctctcaccgacgccattcccgtgtggaagcgtgcgcag
gacggcgcgatcatcaccgggtgggactacccgtcgtgcgaggccatcggtctgctcaag
atggacttcctcggtctgcgcaacctcaccgtcatcggtgacgccatcgacaacatcaaa
gccaaccgcggcatcgacatcgacctggactcgttgcctctcgacgatccggcgacgttc
gagttgctttcccgcggtgacacactcggagtgttccagctcgacggtagtgcgatgcgc
gacctgctgcgacgcatgcagcccaccggattcgaggacatcgtcgctgttctcgcactg
tatcgcccgggcccgatgggcatgaactcgcacaacgactacgccgatcgcaagaacggc
cgtcaagaggtcaagccgattcacgccgagctcgaagagccgctcaaggtcattctcgga
cagacctacggcctggtcgtgtaccaggagcagatcatgcagctggcacagaaggttgcc
ggatactcgctcggtcaggccgacctgctgcgtcgagcaatgggtaagaagaagctgtcg
gagctggagaaggcgtacgccggattccggcagggcatgttggacaacagtttctccgag
gccgccatcaaggcgctgtgggacaccgtgcttccgttcgcgggctacgcgttcaacaag
tctcactccgccggctacgggctggtgtcgtactggaccgcgtacctcaaggccaactac
ccgagcgagtacatggccggcttgctcaccagtgtcagtgacgacaaggacaagtcggcg
atctacctcgccgactgtcgcaagctcggaatcactgtgctcccaccggatgtcaacgag
tccgagctcaacttcgcctcggtcggcaaggatatccggttcggcctcggtgctgttcgc
aacgtcggcaccaacgtggtggcgtcgatcatcagggcgcgcgaggagaagagcaagtac
accgacttctcggactacctgaacaagatcgacgcaaccgcctgcagcaaaaaagtgacc
gaatcactcatcaagtcgggtgcattcgattcgctcgagcatccgcgcaaaggcctgatg
ctcattcacgccgacgccatcgactcggtgatgggaaccaagaaggccgaggcaatcgga
cagttcgacctcttcggcggcgaggacgcggacgagtcaatctcatcggtgttcaacgtc
cgtgtgccggacgaggaatgggagtccaagcaccgcctcgcactggagcgagagatgctc
ggcctctacgtgtcggggcacccgctgctcggcgtcgagcacatgttggctgcgcagtcc
gataccaacatccccgcgatcctcgaaggcgacatcaaggacgggacccaggtcaccatc
ggcggaattctcgcgtcggtcaaccgcagaatcaacaagaacggcctgacctgggcgtcg
gcacagctcgaagacctcgtcggcggaatcgaagtgctgttcttcccacagtcgtactcg
gtgttcggtgcagacgtgaccgaggactcggttgtgctggtgaaggggcgggtctcggtc
cgcgacgatcgcatctcactgatcgccaacgaccttgccgtgcccgatctctcggcagtc
ggtgtcgcaaggccgctcgccgtgagcttgccgacacgtcagtgcacagctgacaaggtc
ggagcgctgaagaagattctgatgagtcaccccggaacgtcggacgtgcacctgcggttg
gtgagcggagacaaagtcacggccatgaaactcgacgacagtttgcgcgtcacgccgaca
tcggcgttgatgggtgacctgaaggcactcctcgggcctgggtgcctggccggctga
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