Rhodococcus sp. P1Y: D8W71_19985
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Entry
D8W71_19985 CDS
T09477
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rhop
Rhodococcus sp. P1Y
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhop03021
]
D8W71_19985
Transcription machinery [BR:
rhop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D8W71_19985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
MarR_2
DUF7343
HTH_Crp_2
KORA
Sigma70_ECF
HTH_3
HTH_24
HTH_28
HTH_31
GerE
HTH_7
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AYJ50189
LinkDB
All DBs
Position
complement(4335327..4336112)
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AA seq
261 aa
AA seq
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MPVPYEKPTRRQSDDYSEVVPLIQQMQALEVGSPARQVLRDRIITRCLPLAEHIARRFGG
RGEAHEDLLQVARLGLVNAVDRFDIERGSDFVSFAVPTIMGEARRYFRDAGWSVRVPRRM
KELNSMISGAVGTLSQKLGRAPTASEIAAELDIDVKEASQALLARSAYQTVSVDSVVSDD
RLPLMDTLGADDPELEKMESYLTVRPALEKLPERERQIVILRFFGSMTQTQIAERMGISQ
MHVSRILARTLAQLRDDLGPS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtgccgtacgaaaaaccgacgcggcgtcagtcggacgattacagcgaagtagtt
cccctcattcagcagatgcaggctctcgaagtcggctctcctgcacgtcaggttttgcgg
gaccgcatcatcacgcggtgcctccctctcgccgaacacatcgcccgtaggttcggcggt
cgtggtgaagcgcacgaagatctcctccaggtggctcggctcggtctcgtcaatgctgtc
gatcgtttcgacatcgaacgcggatcggatttcgtctcgttcgccgtgcccacgatcatg
ggcgaggcgcgtcgctacttccgtgacgccggctggtcggttcgcgttccgcggcggatg
aaggagctcaactcgatgatttcgggagcggtgggcacactgtctcagaagctcggtcgt
gcgccgacagccagtgagatcgccgccgaactcgacatcgacgtcaaggaagcatcgcag
gcgcttctcgctcgaagtgcttaccagaccgtgtccgtcgactcggtggtcagcgacgac
cgcctacctctgatggacacgctcggggccgacgaccccgagctcgagaagatggagagc
tatctgacggttcgtccggcgctggagaagctgcccgaacgagaacgccagatcgtcatt
ctccggttcttcgggtcgatgacgcagactcaaatcgccgagcggatgggtatttcccaa
atgcacgtgtcgaggatcctcgcgcgaacgttggctcaactgagggatgacctcggacct
agctga
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