Rhodococcus sp. P1Y: D8W71_21590
Help
Entry
D8W71_21590 CDS
T09477
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D8W71_21590 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_21590 (recD)
Enzymes [BR:
rhop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D8W71_21590 (recD)
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D8W71_21590 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
SH3_13
TraI_hel_assoc_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AYJ50439
LinkDB
All DBs
Position
complement(4694090..4695955)
Genome browser
AA seq
621 aa
AA seq
DB search
MIDAQLVQRARGRLGVFNGAGILAAADVHVALRLGALGGETDEDVLFAAALAVRAVRSGS
VCLDLRRLRDVTVDEESDVDVDALPWPELADVLAALRASPLVVGGQRGPLRPLRLVDTDE
GELLYLDRYFLQERTIRTVLDTREGTRPEVDTAAVRALLDSLFVDGSNRPTAVPDRQRIA
AALAATQWTTVIAGGPGTGKTHTVARVLAMFVEQLGPSIRIGLAAPTGKAAARLQESVTD
QSAELGLPSNLTAMTLHRLLGWQRGSKSRFRHNASNRLPYDVIVVDETSMVSLTMMCRLL
EAVRADTRLILVGDPDQLTSVDAGAVLADLVARPVRSTVSPDLVTLVGGDLDARDDPNET
ALSPKEQSRLGGGVVRLSRGRRFGGAIAELAVSVRDGDPDRAMQLLRADTEELSFHAPTD
LDALHSDILSAASTVTSAARAGLAAEALAGLETHRLLCAHRQGPYGVQAWARRAMEWVGE
SSGAFLDPAQWYPGQPLLVTANDHEARIYNGDTGVIVDVGDGALMAAFQRGAQPLLVHPN
VLSSVQTVYAMTIHRSQGSQYDTVSVMLPEQASSLLTRELLYTAITRARRHVRIIGTEDA
VRAGVDRQVLRASGLRRTILP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgcagttggttcagcgtgctcggggtcgcctcggggtcttcaacggtgca
ggaattctcgccgctgccgatgtgcatgtcgcgctcaggctcggcgccctcggtggcgag
acggacgaggatgtgctctttgccgccgctctggccgtgcgagcagtcaggtcgggctcg
gtatgcctggatctgcggcgccttcgagatgtgacggtcgacgaggaatccgatgtcgac
gtagacgctcttccttggccggaactcgccgacgtgctggcagcgttgcgcgccagtccg
ctcgtcgtcggcggacagcgcggtccactcaggccgcttcggctggtcgacaccgacgaa
ggcgagttgctctacctcgaccggtatttcctgcaggaacgaaccatccgcacggtgttg
gatacgcgcgagggcacccgacccgaggtcgatacggcagcggttcgggcattgttggat
tccctgttcgtggatggctccaatcgaccgacggctgttccggaccgtcagcgcatagcg
gcggcgctggcggccacgcaatggacgaccgtcatcgcgggcggtccgggaacaggtaag
acgcacacggtcgctcgcgtactggcaatgttcgtcgagcaactgggtccgtccatcagg
atcgggctggccgcgccgactggtaaagccgctgcgcggctgcaggagtcggtgacagac
cagtcagcggaactcggtttaccctcgaaccttactgcgatgacgctgcatcggctgctg
ggctggcagcgaggcagcaagagccggttccggcacaacgcgtcgaaccggttgccctac
gacgtgatcgtcgtcgacgagacgtccatggtgtccctgacgatgatgtgtcggcttctc
gaagcggtccgcgcggatacgagattgattctcgtcggcgatcctgatcagttgacctcg
gtcgacgcgggtgcagtgctggccgatcttgttgcgcgacctgtacgcagtaccgtgagc
cccgacctcgtcacgctggtcggcggcgacctggacgcacgcgacgacccgaacgagact
gcactgtcgccgaaggagcaatccaggctcgggggcggagtcgtacgactgagccgtggc
aggaggttcgggggagccattgccgaattggccgtctcggtccgcgacggtgatccggat
cgagcgatgcagctgcttcgtgccgataccgaagaactgtcttttcacgcgcccaccgat
ctcgatgcgctccactccgacatcctcagcgctgcgtcgaccgtgacgtctgcagctcgt
gcagggctggctgcagaagcgctcgccgggctcgaaacgcatcggttgctgtgtgcgcac
aggcaggggccatacggagttcaggcctgggcgcgacgggcgatggaatgggtgggcgag
tcgtcgggggcgtttctggatccggctcagtggtacccgggccagccgctgctcgtcacc
gcgaacgaccatgaagctcgcatctacaacggcgacaccggagtgatcgtcgacgtcgga
gacggggcgctcatggcagcattccagcgtggagcccagccgttactcgtccatcccaac
gtgttgtcctcggtgcagacggtgtacgcgatgaccatccaccgcagccagggcagccag
tacgacaccgtatcggtcatgctgcccgaacaagcatcgtcgctgctgacccgggaactt
ctctacaccgccatcaccagggcgcggcggcacgtgcggatcatcggaaccgaggacgcc
gtgcgtgcaggagttgatcggcaggttctacgagccagtggacttcgccggacgatcctc
ccgtga
DBGET
integrated database retrieval system
