Rhodococcus sp. P1Y: D8W71_24080
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Entry
D8W71_24080 CDS
T09477
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D8W71_24080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_24080
Enzymes [BR:
rhop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D8W71_24080
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D8W71_24080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AYJ50851
LinkDB
All DBs
Position
5228541..5229410
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AA seq
289 aa
AA seq
DB search
MDGPPDVLPATSRSCDDRRGDTCGRRPLRGSRRTDRTGVGPRRGGHSGSRRQVGPVERVD
QLDHAVSQCRACRRLVNWREKVATEKRAAFRDQTYWGRAVPGFGPADARVLIVGLAPAAH
GANRTGRMFTGDRSGDYLYAALHAVGLANQPTSTHIDDGLTLRGVRITAPVHCAPPDNKP
TVTERDRCRKWLDIELRLLKPTLRSIVVLGGFGWQSLLPTLENNGWDIPRPRPKFGHGVE
VDLGEIRLFGSYHVSQRNTSTGTLTPSMIEDVLRAAGSHAGLSVSSAAN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacggtccgccagacgttcttccagcgacgagccggagttgcgacgatcgtcgcggc
gacacctgcgggcgtcggccactacgaggttctcgacgtaccgatcgaacaggcgtgggc
cctcgtcgaggcggtcactccgggagccggcgacaagtgggcccagtagagcgcgtcgac
caactcgatcacgccgtgtcgcagtgccgcgcgtgccgacgcttggtcaattggcgcgaa
aaggtcgccaccgagaagcgggccgcgtttcgcgaccaaacctattggggtagagcggtt
cccggattcggcccggcagacgcacgcgtactgatagtcgggctggctccggcagcccac
ggtgcgaaccgcaccggacgcatgttcaccggagaccgcagcggcgactacctctacgcg
gcgctgcacgcagtcggacttgccaaccagcccacgtcgacgcacatcgacgacggcttg
acgcttcgaggcgtccggatcaccgcgccggtgcactgcgcaccgccggacaacaagccc
accgtcaccgaacgcgaccgctgccggaaatggctcgacatcgagcttcgactgctgaaa
ccgacattgagatcgatcgtcgtactcggcggtttcggttggcagtcattgctgccgacg
ctggagaacaacggttgggacataccgcggcccaggccgaagttcggacacggcgtcgaa
gtcgatctgggcgaaatacggctgttcggcagttatcacgtcagccaacgaaacacctct
accgggacgctgaccccgtcgatgatcgaggatgtgctccgggcagcggggtcgcatgcg
gggttgtcagtgtcttcagccgccaactga
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