KEGG   Rhodococcus sp. P1Y: D8W71_25670
Entry
D8W71_25670       CDS       T09477                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhop  Rhodococcus sp. P1Y
Pathway
rhop00010  Glycolysis / Gluconeogenesis
rhop00020  Citrate cycle (TCA cycle)
rhop00260  Glycine, serine and threonine metabolism
rhop00280  Valine, leucine and isoleucine degradation
rhop00310  Lysine degradation
rhop00380  Tryptophan metabolism
rhop00620  Pyruvate metabolism
rhop00630  Glyoxylate and dicarboxylate metabolism
rhop00640  Propanoate metabolism
rhop00670  One carbon pool by folate
rhop00785  Lipoic acid metabolism
rhop01100  Metabolic pathways
rhop01110  Biosynthesis of secondary metabolites
rhop01120  Microbial metabolism in diverse environments
rhop01200  Carbon metabolism
rhop01210  2-Oxocarboxylic acid metabolism
rhop01240  Biosynthesis of cofactors
Module
rhop_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhop_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhop_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    D8W71_25670 (lpdA)
   00020 Citrate cycle (TCA cycle)
    D8W71_25670 (lpdA)
   00620 Pyruvate metabolism
    D8W71_25670 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    D8W71_25670 (lpdA)
   00640 Propanoate metabolism
    D8W71_25670 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    D8W71_25670 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    D8W71_25670 (lpdA)
   00310 Lysine degradation
    D8W71_25670 (lpdA)
   00380 Tryptophan metabolism
    D8W71_25670 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    D8W71_25670 (lpdA)
   00670 One carbon pool by folate
    D8W71_25670 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhop04147]
    D8W71_25670 (lpdA)
Enzymes [BR:rhop01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     D8W71_25670 (lpdA)
Exosome [BR:rhop04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   D8W71_25670 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 GIDA FAD_oxidored NAD_binding_8 HI0933_like FAD_binding_2 Thi4 DAO 3HCDH_N Lys_Orn_oxgnase ApbA AlaDh_PNT_C 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AYJ51119
UniProt: A0A494SZ22
LinkDB
Position
complement(5546921..5548336)
AA seq 471 aa
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEQKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKLFGISGEASFDFGAAFDRSRKVADGRVKGIHFLMKKNKIPEYDGKGTFTDAN
TIEVELTKGGTETLTFDNAIISTGSTTKLLPGTSLSENVVTYEEQIMTKELPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEYLDRALPNEDKDVSKEIEKQYKKLGVKVITGAGVQSID
DDGSKVTVEIKHNKSGESETFTVDKVMQSVGFAPRVEGFGLEKTGVELTDRGAIGITNTM
QTNVPHIYAIGDVTAKLQLAHVAEAQAVVAAETIGGAETLPIDDYRMMPRATFCQPQVAS
FGLTEDQAREEAQARGSDIKVANFPFAANGKAHGLGDATGFVKLIADTEHGELLGGHLIG
PDVSELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq 1416 nt   +upstreamnt  +downstreamnt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacaactcggactgagcactgccatcatcgaacagaagtattggggcggt
gtctgcctgaacgtcggctgcatcccctcgaaggcacttctccgtaacgccgaacttgcg
cacctcttcaccaaagaggcgaagttgttcggtatctccggcgaagcatccttcgacttc
ggcgcagcattcgatcgcagccgcaaggttgccgacggccgcgtcaagggaatccacttc
ttgatgaagaagaacaagatccccgagtacgacggcaagggcaccttcaccgacgccaac
accatcgaggtcgagctcaccaagggcggcaccgagacgttgacgttcgacaacgccatc
atctccaccggtagcaccaccaagctgctgccgggcacgtcgctgagcgagaacgtcgtc
acgtacgaagagcagatcatgacgaaggagctcccgggttccatcctcatcgtcggcgcg
ggcgccatcggcatggagttcggctacgtcctgaagaactacggtgtcgacgtcaccatc
gtcgagtacctcgatcgcgcgctccccaacgaggacaaggacgtctcgaaggagatcgaa
aagcagtacaagaagctcggcgtcaaggtcatcaccggtgccggcgttcagagcatcgac
gacgacggatccaaggtgaccgtcgagatcaagcacaacaagtccggtgagagtgagacg
ttcaccgtcgacaaggtgatgcagtccgtcggattcgcacctcgcgtcgaaggcttcggt
ctcgagaagaccggcgtcgagctgaccgaccgcggcgccatcggcatcacgaacacgatg
cagaccaacgttccgcacatctacgcgatcggcgacgtgacggccaagttgcagctcgcg
catgtcgcggaggcgcaggcagttgttgctgcggagaccatcggcggggccgagaccctc
ccgatcgacgactaccgcatgatgccgcgcgcgacgttctgtcagccgcaggtcgccagc
ttcggtctcaccgaggatcaggcccgcgaagaagctcaggctcgtggctcggacatcaag
gtcgcgaacttcccgttcgccgccaacggcaaggcacacggactcggtgacgccaccggc
ttcgtcaagctgatcgccgacaccgagcacggcgagttgctgggcggacacctcatcgga
cccgacgtctccgagctgctccccgagctgaccctcgcccagaagtgggacctgacggtc
aacgagctggcccgaaacgtccacacgcacccgacgctgtcggaggcgctgcaggaggcc
atccacggcctcgccggacacatgatcaacttctga

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