Rhodococcus sp. M8-33: QWW98_00855
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Entry
QWW98_00855 CDS
T10460
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoq Rhodococcus sp. M8-33
Pathway
rhoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWW98_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoq03019
]
QWW98_00855
03400 DNA repair and recombination proteins [BR:
rhoq03400
]
QWW98_00855
Enzymes [BR:
rhoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWW98_00855
Messenger RNA biogenesis [BR:
rhoq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWW98_00855
DNA repair and recombination proteins [BR:
rhoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWW98_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
KORA
SWI2_SNF2
AAA_22
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
WVN76349
LinkDB
All DBs
Position
complement(184557..186659)
Genome browser
AA seq
700 aa
AA seq
DB search
MSTATTDLRDEAERLLRDLAGPGARLREDQWSAIEALVVHRRRALVVQRTGWGKSAVYFI
SAKLLRAHGHGPTVIVSPLLALMRNQVESAQRAGVRAATINSGNVTEWEEIHRQVAEGAV
DVLLVSPERLNNPDFRDQVLPALARDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLVTEIG
EGIPVLATTATANDRVVADVAAQLGVGEGTGETLVLRGGLDRPSLHLSVLRIDEPARRAA
WLAQHLDELPGSGIVYTLTVSAAHDLAALLSEHGHTVAAYTGQSDPAEREQLEADLLANR
VKALIATSALGMGFDKPDLGFVVHLGAPSSPISYYQQVGRAGRATERAEVILLPGPEDRQ
IWSWFASVAFPGEEVVRRVIEVLEPERPQSTQALEPLVDLNRSRLEMVLKVLDVDGAVRR
VKGGWIATGVPWEYDAARYATLERAREAEQEAMLEYERTTRCRMVFLRTQLDDPDLTSDT
PGCGRCDNCCGARWPADVDDTELGRVRARLDRPGVDLPPRRQWPTGMAKLGVTLSGKITD
GPEPGRVLGRLSDLGWGPRLRALLDGPDAPVPDAVVQAAVAVLKAWDWSDRPTAVMAVES
ATHPRLVGSLAARLAQLGRLEDLGVLRARPGRPPVTAANSAYRIAGLVDAWESPDLRGNR
GPILLVDAVTDTGWTMTMAARTLIRAGASAVLPLALASPK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccaccacggatctgcgcgacgaggccgaacgactgctccgcgacctggcg
ggacccggcgcccggttgcgggaggaccagtggagcgccatcgaggcactggtggtgcat
cgccggcgagcgctggtcgtgcagcgcacgggctggggcaagtcggccgtctacttcatc
tccgccaagctgctccgcgcccacgggcacgggccgaccgtgatcgtctccccgctcctg
gccctgatgcgtaaccaggtcgagtcggcgcagcgcgcgggcgtccgcgcggccacgatc
aattccggcaacgtcaccgagtgggaggagatccaccggcaggtcgccgagggcgcggtg
gacgtcctgctcgtcagcccggagcggctcaacaacccggacttccgcgaccaggtgctg
ccggcgctcgcccgcgacgccggactggtggtggtcgacgaggcgcactgcgtctcggac
tggggacacgacttccggccggactaccggcgcatccgcaccctcgtcaccgaaatcggc
gagggcattccggtgctcgcgaccaccgcgaccgcgaacgaccgggtcgtggcggacgtg
gccgcgcagctcggcgtcggggagggcacgggcgagaccctggtgctgcgcggtggtctc
gaccggccgtcgctgcacctgtcagtgctgcggatcgacgagcccgcgcgccgggcggcg
tggctcgcccagcacctcgacgagctgcccggttccgggatcgtctacaccctcaccgtg
tcggccgcgcacgacctggccgcgctgctctccgagcacggtcacaccgtcgcggcgtac
acggggcagtccgatccggccgagcgggagcagctggaggcggacctcctcgccaaccgg
gtcaaggccctgatcgccacctcggccctgggcatgggtttcgacaagccggacctcggg
ttcgtggtgcacctgggagcaccgtcctcacccatctcctactaccagcaggtcggtcgc
gcgggccgtgcgaccgagcgggcggaggtgatcctgcttccgggccccgaggaccggcag
atctggagctggttcgcgtcggtggccttcccgggggaggaggtggtgcggcgggtgatc
gaggtgctcgagccggagcggccgcagtccacgcaggccctcgagccgttggtcgacctc
aaccggtcccggctggagatggtgctcaaggtgctcgacgtggacggtgcggtacgccgg
gtgaagggcggctggatcgccaccggcgtgccctgggagtacgacgccgcccggtacgcg
acgctcgagcgggcccgcgaggccgagcaggaggcgatgctcgagtacgagcggaccacc
cggtgccggatggtgttcctgcgcacccagctcgacgatcccgacctgacgtccgacacc
ccgggctgcgggcggtgcgacaactgctgcggggcgcggtggcccgcggacgtcgacgac
accgagctgggccgggtgcgggcccggctggaccggccgggggtggacctgccgccgcgg
cggcagtggccgacggggatggccaagctcggcgtgacactgtccgggaagatcaccgac
gggcccgagccgggccgggtactcggccggctgtcggacctcggatggggtccgcggctg
cgggcgctgctggacggccccgatgcgccggtgcccgacgcggtggtgcaggccgccgtg
gcggtgctcaaggcgtgggactggtcggatcgcccgaccgcggtgatggccgtggagtcg
gcgacccatcctcgcctggtcggttccctggcggcgcggctggcgcagctcggccggctc
gaggatctcggcgtgctgcgtgcccggcccggccggcccccggtgacggcagcgaactcg
gcgtaccggatcgccggcctcgtggacgcgtgggagagccccgacctccgcgggaaccgg
ggaccgatcctgctcgtcgacgcggtcaccgacaccggctggacgatgacgatggcggcg
cggaccctgatccgggccggggcctccgcggtgctgccgctggcgctggcgagcccgaaa
taa
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