Rhodococcus sp. M8-33: QWW98_01435
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Entry
QWW98_01435 CDS
T10460
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoq Rhodococcus sp. M8-33
Brite
KEGG Orthology (KO) [BR:
rhoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoq03016
]
QWW98_01435 (truB)
Enzymes [BR:
rhoq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QWW98_01435 (truB)
Transfer RNA biogenesis [BR:
rhoq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QWW98_01435 (truB)
Prokaryotic type
QWW98_01435 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WVN76456
LinkDB
All DBs
Position
311315..312223
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AA seq
302 aa
AA seq
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MSASENPALARAGLLVVDKDPGMTSHDVVARCRRLLGTRKVGHAGTLDPMATGVLVLGVE
RATKMLGLLALTTKAYSATIRLGQSTVTDDAEGEVLATTDASAVADEAIAAAVAALTGEI
SQVPASVSAIKIDGKRAYARMREGETVELAARPVTVSRFEVLSRRTTSDGFVDLDVEVEC
SSGTYIRALARDLGAALGVGAHLTALRRTRVGPFGLEHARTLAQLEESPAVSLDIDAAVR
TAFPCRDVTAAEAELLANGRWLDPVGIPGVYAAIDPSGRAAALLQEKGKRASAVFVVRPA
TM
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcctccgagaaccccgcccttgcccgtgccggcctgctcgtcgtcgacaaggac
ccgggtatgaccagccacgacgtggtggcccgctgccggcggctgctcggcacccgcaag
gtcggtcatgccggcaccctcgacccgatggcgacgggcgtgctcgtgctcggggtggag
cgcgcgacgaagatgctgggcctgctcgccctcaccaccaaggcgtattcggcgacgatc
cggctcgggcagagcaccgtcaccgacgacgccgagggtgaggtgctcgcgaccaccgac
gcctccgccgtcgcggacgaggcgatcgcggcggccgtcgccgcgctcacgggggagatc
tcccaggtgcctgccagtgtcagcgcgatcaagatcgacggcaagcgcgcctacgcccgg
atgcgcgagggggagaccgtcgagctcgcggcccggccggtcacggtctcgcggttcgag
gtgctgtcccggcggaccacctcggacgggttcgtcgatctcgacgtcgaggtggagtgc
tcgtccggcacctacatccgggcgctggcccgggatctgggggccgccctgggcgtcggc
gcgcacctgacggcgctgcggcgcacccgggtcggcccgttcgggctcgagcacgcccgc
acgctcgcccagctcgaggagagcccggccgtgagcctggacatcgacgcagccgtccgc
accgcgttcccgtgccgcgacgtcaccgcggcggaggcggaactgctggcgaacggccga
tggctggatccggtggggattcccggcgtgtacgcggcgatcgacccgtccggccgggcc
gcggcgctgctgcaggagaagggcaagcgggcctcggcagtgttcgtcgtgcgcccggcc
accatgtag
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