Rhodococcus sp. M8-33: QWW98_19060
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Entry
QWW98_19060 CDS
T10460
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhoq Rhodococcus sp. M8-33
Brite
KEGG Orthology (KO) [BR:
rhoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoq03400
]
QWW98_19060
DNA repair and recombination proteins [BR:
rhoq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
QWW98_19060
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Glyoxalase_6
DUF6456
Motif
Other DBs
NCBI-ProteinID:
WVN74515
LinkDB
All DBs
Position
complement(4194892..4195317)
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AA seq
141 aa
AA seq
DB search
MPSTDPQTSARMSRQRRRDTVPEVALRRELHRRGVRYFVDRAPLPGIRRRADLVFPRRRV
AVYVDGCFWHRCPQHATDPKNNAEWWAAKLAGNVARDRDTDAALAAAGWTAVRIWEHEDP
AEAADRVQAALFAAGPGTADS
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
gtgccctccaccgatccgcagaccagcgcccggatgagccggcagcggcgcagggacacc
gtccccgaggtggccctgcgccgggagttgcatcgtcgcggggtgcgctacttcgtcgat
cgtgctcccctgccggggatccgtcgtcgtgccgacctggtgttcccgcgccgccgcgtt
gcggtgtatgtcgacgggtgcttctggcatcgttgcccgcagcacgccaccgatccgaag
aacaacgccgagtggtgggccgccaagctcgccgggaacgtggcccgggaccgggacacc
gacgcggcgctcgccgcggccggatggacggcggtgcggatctgggagcacgaggacccc
gcggaggccgcggatcgggtgcaggccgcattgttcgcggcgggaccgggtactgccgat
tcctga
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