Rhodococcus sp. M8-33: QWW98_26460
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Entry
QWW98_26460 CDS
T10460
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoq Rhodococcus sp. M8-33
Pathway
rhoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWW98_26460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoq03019
]
QWW98_26460
03400 DNA repair and recombination proteins [BR:
rhoq03400
]
QWW98_26460
Enzymes [BR:
rhoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWW98_26460
Messenger RNA biogenesis [BR:
rhoq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWW98_26460
DNA repair and recombination proteins [BR:
rhoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWW98_26460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
LSDAT_prok
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WVN75881
LinkDB
All DBs
Position
complement(5743612..5745315)
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AA seq
567 aa
AA seq
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MTATVQDAADTTGPRDIRAELRAAARRVFGWEELRPGQLDAMEPLVRGRDVLAVMATGSG
KSAIYQVPALLIEGTTLVISPLIALQNDQIAGLDATSAPDAVAINSRQRASATAAAWETI
RERTVEYVFLAPEQLANDEVVARLADAHVSLVVVDEAHCVSAWGHDFRPDYLRLADALDR
LGRPPVVALTATASPPVRQEIVEELRLRDPVVIASGFDRPNIDLAVERYTTDAEKRRAVI
ETVAGLETPGLLYTATRKDAEFYAAELAERGLRAAAYHAGLPSATRERVHHGFLDGEYEV
VAATSAFGMGIDKPDVRFVAHASAPDSVDSYYQQIGRAGRDGLEAKALLFYRPEDLSLAK
FFTTHRPDEELLGRAFTALRRAKAPTRLKDLRAELDTRGRTLTNAVNLLERAGVVSSGRK
GFTARTVEVEIAVRRAAEVAAVGERMDRSRVEMMRGYAETRGCRRQFLLGYFGESLLEPC
GHCDCCREGIPESRPEPANHVRHESIPLHTRVVHAQWGAGEVMSAETDRITVLFDGYGYR
TLSLEAVEEHDLLRPENSEPEPEPDIA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttgacggcgaccgtgcaggacgcagccgacacgaccggaccgcgtgacatccgggccgag
ctacgggcggccgcgcgccgcgtgttcggctgggaggaactgcgtcccggccagctcgac
gcgatggaaccgctggtgcggggccgggacgtgctcgcggtgatggccaccggatcgggc
aagtcggcgatctaccaggtgccggcgttgctgatcgagggcacgaccctggtgatctcc
ccgctcatcgcgctgcagaacgatcagatcgcaggtctcgacgccacctcggcgccggac
gcggtcgcgatcaattcccggcagcgggcctcggcgaccgcggccgcgtgggagacgatc
cgggagcgcaccgtggagtacgtcttcctggcgccggagcagctcgccaacgacgaggtg
gtggcccgtctcgccgacgcgcacgtctccctcgtggtggtcgacgaggcgcactgtgtg
tccgcgtggggccacgacttccggcccgactacctgcgcctggccgacgcgctcgaccgg
ctcggccggcccccggtggtggcgctcacggccaccgcgtcgccgccggtgcggcaggag
atcgtcgaggagctgcgcctgcgcgacccggtggtgatcgccagcggattcgatcggccc
aacatcgatctggccgtcgagcggtacacgaccgacgccgagaaacgccgggcggtgatc
gagacggtcgccggactcgagacgcccgggctgctgtacaccgcgacgcgcaaggacgcc
gagttctatgcggccgaactggccgaacggggactgcgagcggccgcgtaccacgccggc
ctgccgtcggccacgcgcgagcgggtacaccacgggttcctcgacggcgagtacgaggtg
gtggcggcgacctccgcgttcggcatgggcatcgacaagcccgacgtgcggttcgtcgcg
cacgcctccgcgccggattccgtggacagctactaccagcagatcggccgggccgggcgc
gacgggctcgaggcgaaggcgctgctgttctaccggcccgaggacctctcgctcgcgaag
ttcttcacgacccaccgcccggacgaggaactgctcggccgggcgttcaccgcgctgcgg
cgcgcgaaagccccgacgcgactgaaagacctacgcgccgaactggatacccgcggacgg
accctgaccaacgcggtcaacctgctcgaacgggccggggtggtctcctcgggacgcaag
gggttcaccgcacgcaccgtcgaggtggagatcgccgtccggcgcgcggcggaggtggca
gcggtgggcgaacggatggaccgctcccgcgtggagatgatgcgcggctacgccgaaacc
cgcggctgccgaaggcagttcctgctcgggtacttcggcgagtcgctgctcgaaccgtgc
ggccactgcgactgctgccgcgaggggatccccgagagccggcccgagccggcgaatcat
gttcgtcacgaatcgattccgctacacacccgggtcgtgcacgcgcagtggggcgccggc
gaggtgatgagcgcggagacggaccggatcaccgtgctgttcgacggatacggctaccgc
accctctcgctcgaggcggtcgaggagcacgacctgctgcgccccgagaactcggagccc
gagccggagcccgacatcgcctga
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