Rhodopseudomonas sp. P2A-2r: ONR75_02300
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Entry
ONR75_02300 CDS
T10299
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhor Rhodopseudomonas sp. P2A-2r
Pathway
rhor00300
Lysine biosynthesis
rhor00470
D-Amino acid metabolism
rhor01100
Metabolic pathways
rhor01110
Biosynthesis of secondary metabolites
rhor01120
Microbial metabolism in diverse environments
rhor01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rhor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ONR75_02300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ONR75_02300 (dapF)
Enzymes [BR:
rhor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ONR75_02300 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
DUF2924
Motif
Other DBs
NCBI-ProteinID:
UZE49670
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All DBs
Position
487341..488213
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AA seq
290 aa
AA seq
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MSALANHAFAKMNGIGNEIVVIDLRDSTAAVTPDEARAVAGPGGVPFDQLMVLQKPRLAG
TDAFVSIYNNDGSEAGACGNGMRCVAQQTFADGGKTALTFETKAGLINCWQGPAADLYTV
DMGVPKFGWQDIPLAEEFRDTRGIELQIGPIDAPILHTPSVVSMGNPHAIFWVDDIAAYE
LEKFGPLLENHPIFPDRANITLAHVVDRDHIGMRTWERGAGLTKACGSAACATAVAAARL
KRTNRIVHMTLPGGELTIEWRERDDHVLMTGPATFEYAGRFDPALFKSVA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gtgatcgacctgcgcgatagcacggccgccgtgacgccggacgaggcccgcgcggtggcc
ggccccggcggcgtgcccttcgaccaactgatggtgctgcagaagccgcggctggcgggc
acggatgccttcgtgtcgatctacaacaatgacggctcggaggccggcgcctgcggcaac
ggcatgcgctgcgtggcgcagcagacctttgccgatggcggcaagaccgcgctcaccttc
gagaccaaggctgggctgatcaattgctggcaggggccggccgcggacctctacaccgtc
gacatgggggtgccgaagttcggctggcaggacatcccgctggccgaggagtttcgcgac
acccgcggcatcgaattgcagatcgggccgatcgacgcgccgatcctgcatacgccgtcg
gtggtcagcatgggcaatccgcatgcgatcttctgggtcgacgacatcgccgcctacgaa
ctcgaaaagttcggaccgctgctggaaaaccatccgatctttcccgaccgcgccaacatc
acgctggcccacgtcgtcgaccgcgatcacatcgggatgcggacctgggagcgcggcgcc
gggctgaccaaggcgtgcggttcggcggcctgcgccaccgcggtggcggcagcccggttg
aagcgcaccaaccgcatcgtgcacatgacgctgcccggcggcgaactgaccatcgagtgg
cgcgagcgcgacgatcacgtcctgatgaccggtcccgccaccttcgaatacgcggggcga
ttcgatccggcgctgttcaagtccgtcgcgtga
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