Rhodopseudomonas sp. P2A-2r: ONR75_15125
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Entry
ONR75_15125 CDS
T10299
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhor Rhodopseudomonas sp. P2A-2r
Brite
KEGG Orthology (KO) [BR:
rhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhor03032
]
ONR75_15125 (topA)
03400 DNA repair and recombination proteins [BR:
rhor03400
]
ONR75_15125 (topA)
Enzymes [BR:
rhor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ONR75_15125 (topA)
DNA replication proteins [BR:
rhor03032
]
Prokaryotic type
DNA Topoisomerases
ONR75_15125 (topA)
DNA repair and recombination proteins [BR:
rhor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ONR75_15125 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UZE51778
LinkDB
All DBs
Position
complement(3167643..3170393)
Genome browser
AA seq
916 aa
AA seq
DB search
MNIVIVESPSKAKTINKYLGSDYEVLASFGHVRDLPAKNGSVDPDANFQMIWEIDPKAAS
RLNDIARALKGADKLILATDPDREGEAISWHVLEVLKEKRALKDHKIERVVFNAITKQAV
TEAMKNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLLTTLSTPRGESFEARLVGADGRKLQRLDIGTGAEAEDFKQAIEAA
KFEVTTVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAITMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDSSAIVQARAVIGEDYGKQYVPEAPRQYVAKAKNAQEAHEAIRPTDMSR
RPDSLKGRLDNDQYRLYDLIWMRTIASQMESAEMERTTVDITAKAGARVLELRATGQVMK
FDGFLAVYQEGRDDDSEDEDSRRLPAMSEGEPLKKEKLDVAQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLENFFARYVEYDFTAAL
EEQLDKISNNEISWQQVLRDFWGDFIGAVNEIKDLRVTQVLDALDDMLGPHIYAPREDGG
DPRQCPTCGTGKLNLKAGKFGAFVGCTNYPECRYTRPLAADSEASADRILGKDPKTDLDV
TVKAGRFGPYIQLGDAKDYGEGEKPKRAGIPKNTSPSDIELDIALKLLSLPREIGKHPES
GEPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKILKGPSGRRFGADPG
KALGEHPQRGGTITVKNGRYGAYVSVDGINATLPSDKTPETITLEEAIALIEERAAKGGG
KPKRGAKKKAPAKKAAAKADTADKKPAKKAVAKKAAAKPKAEGAAASKARAPVKAKTTPA
KKAAKTVAKKSAGKNG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtcgagtcgccttccaaggccaagacgatcaacaagtacctcggc
tccgactacgaggtgctggcttcgttcggccatgtgcgcgaccttcctgccaagaacgga
tcggtcgatcccgacgctaacttccagatgatctgggagatcgacccgaaggcggcaagc
cggcttaacgatatcgcccgggcactcaagggcgccgacaagctaatcctcgcaaccgac
cctgatcgcgaaggtgaagcgatctcctggcacgtgctcgaggtgctcaaggaaaagcgc
gcgctcaaggaccacaagatcgaacgcgtcgtgttcaacgccatcaccaagcaggcggtg
accgaggcgatgaagaacccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgcgcgctcgactatctggtcggctttaccctgtccccggtgttgtggcgcaaactg
cccggcgcccgttcggcgggccgtgtgcagtcggtggcgctgcgccttgtgtgcgaccgc
gaactggaaatcgaaaaattcgtgccgcgcgaatactggtcgctgctgacgacgctgtcg
acgccgcgcggtgaaagttttgaggcccgcctggttggcgccgacggcaggaagctgcag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagcaggccatcgaagccgcg
aagttcgaagtcaccaccgtcgaggcaaaaccggcacgccgcaatccgcaggcccccttc
accacctcgacgctgcagcaggaggccagccgcaagctcggcttcgcgccggcgatcacc
atgcgcatcgcgcagcgtctctatgaaggcatcgacatcggcggcgaaaccaccggtctc
attacgtatatgcgaaccgacggcgtgcagatcgacagttccgcgatcgtgcaggcccgt
gccgtgatcggcgaggactacggcaagcagtacgtgccggaagctccgcggcagtatgtg
gccaaggccaagaacgcccaggaagcccatgaagcgatccgcccgaccgacatgtcgcga
cggccggacagcctgaaggggcggctcgataacgaccagtaccgcctctatgacctgatc
tggatgcgcaccatcgccagccagatggaatccgccgagatggagcgcaccaccgtggac
atcacggccaaggccggcgcccgcgtgctggaactgcgcgccaccggccaggtgatgaag
ttcgacggcttcctcgcggtctaccaggaaggccgcgacgacgattccgaggacgaggac
agccgccgcctgcccgccatgagcgaaggcgagccgctgaagaaggaaaagctcgacgtc
gctcagcacttcaccgaaccgccgccgcgcttttcggaagcatcattggtgaagcgcatg
gaagagctcggcatcggccggccctcgacctatgcctcgatcctgcaggtgctgaaggac
cgcggctatgtgaagctggaaaagaagcgcctgcacggcgaggacaagggccgcgtcgtc
gtcgcgttcctggaaaatttcttcgcccgctatgtggagtatgacttcaccgcggcgctg
gaagagcagctcgacaagatctctaacaacgagatctcctggcagcaggtgctcagggat
ttctggggcgacttcatcggcgccgtcaacgagatcaaggacctgcgcgtgacgcaggtg
ctcgatgcgcttgacgacatgctcggcccgcacatctatgcgccgcgcgaggatggtggc
gacccccgccagtgcccgacctgcggcaccggcaagctcaatctgaaggccggcaagttc
ggcgccttcgtcggctgcaccaactatccggaatgccgctacacaaggccgctcgctgcc
gatagcgaagccagcgctgaccgcatcctcggcaaggacccgaaaaccgacctcgacgtc
accgtcaaggccggccgtttcggcccctatatccagctcggcgacgccaaggactatggc
gaaggcgaaaaaccgaagcgcgcgggcatcccgaagaacacctcgcccagcgatatcgaa
ctcgatatcgctttgaagctgttgtcgctgccgcgcgaaatcggcaagcatccggagagc
ggcgagccgatcaccgcggggctcggtcgtttcggtccgttcgtcaagcacgagaagacc
tatgccagcctcgaggccggcgatgaggtgttcgacatcggcctcaaccgcgccgtgacc
ctgatcgccgaaaagatcctgaagggcccgagcggccggcgcttcggcgccgaccccggc
aaggcgctcggcgagcatccgcagcgcggcggcaccatcacggtgaagaacggccgctac
ggcgcttatgtcagcgtcgacggcatcaatgccacgctgcccagcgacaagacgccggag
accatcacgctcgaggaagccatcgcgctgatcgaggagcgcgccgccaagggcggcggc
aagccgaagcgtggcgccaagaagaaagcgccagcgaagaaggctgcggccaaggccgat
accgccgataagaaaccggccaagaaagccgtcgcgaaaaaggcggcagcgaagcccaag
gccgaaggtgccgcggccagcaaggcgcgcgcgccagtcaaagccaaaaccacgccggcc
aagaaggccgccaaaactgtcgcgaagaagagcgcgggcaagaacggataa
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