Rhodopseudomonas sp. P2A-2r: ONR75_16840
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Entry
ONR75_16840 CDS
T10299
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rhor Rhodopseudomonas sp. P2A-2r
Pathway
rhor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONR75_16840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhor03019
]
ONR75_16840
Enzymes [BR:
rhor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ONR75_16840
Messenger RNA biogenesis [BR:
rhor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ONR75_16840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_11
Spectrin_Dys-1
Motif
Other DBs
NCBI-ProteinID:
UZE52181
LinkDB
All DBs
Position
complement(3495545..3496828)
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AA seq
427 aa
AA seq
DB search
MTMTFADLALAPLLLQALAEEDYSRPTPIQAQSIPMLLLGRDVLGMAQTGTGKTAAFALP
LLHRLAQNPRPAPKGGARVLVLAPTRELVSQIAAGFETFGRHLQPRVTTIFGGVSQFHQV
NALKEGVDIIVAAPGRLLDLIDQGLCDLSGLEALVLDEADQMLDMGFAKPIERIVATLPK
DRQTLLFSATMPKSIAALAESLLRDPAKVEIAPPSTTVNRIEQSVMFMDAAHKKAALLAL
LQTPEIGQAVVFTLQKNIANEVCAFITEAGITAEALHGNKSQGQRERALDAFRAGTVQVL
VATDIAARGIDVDTVTHVFNHDLPSLPESYVHRIGRTGRAGRSGFAITLCDAEQRAWLHD
VEREIGRTLTVHDDHQWHCEVARHSTARAPVLGGGPAKQVKPAKPPRERKIWTEEEKLAA
RMAAKVA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgactttcgccgatctcgctctggcgccattgttgctgcaggcactggccgag
gaagactattcccgcccgaccccgatccaggcccaatccattccgatgctgctgctgggc
cgtgacgtgcttggcatggcgcagacaggcaccggcaagaccgccgccttcgcgctgccg
ctgctgcatcgcctggcccaaaatccccgtccggcgcccaaaggcggtgcccgcgtcctg
gtcctcgcgccgacgcgcgaactggtgtcccagattgcggccggtttcgagacgttcggc
cgccatctgcagcctcgcgtcacaaccatcttcggtggcgtcagtcagttccatcaggtc
aatgcgctcaaggaaggcgtcgacatcatcgtggccgcgcccggccgcctgctggatctg
atcgaccagggcctgtgcgacctgtccgggcttgaagcgctggtgctggacgaggccgac
cagatgctcgacatgggcttcgccaagccgatcgagcgcattgtcgcaacgctgccgaag
gatcggcagaccctgctgttttcggcaacgatgcccaaatccattgccgcgctggccgag
agcctgctgcgcgatcccgcgaaggtcgagatcgccccgccatcgaccaccgtcaaccgg
atcgaacagtccgtgatgttcatggacgcagcccacaagaaggcggcgctgctggcgctg
ctgcagacgccggagatcggacaggccgtcgtcttcaccctgcagaagaacattgccaac
gaagtctgcgccttcatcaccgaggccgggatcaccgccgaggcgctgcacggcaacaag
tcgcagggtcagcgcgagcgtgcgctggacgcttttcgcgccgggacggtgcaggttctg
gtggcgaccgatatcgcggcgcgcggcatcgatgtcgacaccgtgacgcatgtgttcaat
cacgacctgccgagcctgccggaaagctatgttcaccgcatcggccgcaccggtcgcgcc
ggccgcagcggcttcgccatcaccctgtgcgacgccgagcagcgcgcctggctgcatgat
gtggagcgggaaatcggtcggaccttgaccgttcacgacgaccaccagtggcattgcgaa
gtggcgcgccactcgaccgcgcgcgcgccggtgctgggcggcgggccggccaagcaggtc
aagccggcgaaaccgccgcgcgaacgcaaaatctggaccgaggaagagaaacttgccgcg
cgcatggcggccaaggtcgcttaa
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