Rhodopseudomonas sp. P2A-2r: ONR75_19825
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Entry
ONR75_19825 CDS
T10299
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rhor Rhodopseudomonas sp. P2A-2r
Pathway
rhor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONR75_19825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhor03019
]
ONR75_19825
Messenger RNA biogenesis [BR:
rhor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ONR75_19825
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
UZE52224
LinkDB
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Position
complement(4099246..4100916)
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AA seq
556 aa
AA seq
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MTRPDELTFASLGGVGEIGMNLSIYGLGKGNQRSWLAVDLGVYFGDEEHLPGIDLVMPDI
KFLEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSASLFAAKCASERNPPKI
PVTVVPSGGTIQLGPFSVEFIPVAHSIPESHALAIHTSVGTVLHTGDWKIDPTPIIGKPT
DERRLRELGDQGVLALIGDSTNAVREGRSPSEMEVAKTITELMKAAKGRVAVTTFASNVA
RLRAVADAAEASGREVVVVGRAMERVVQVARETGYLEGVRAFRSADYYGHFPADKVVALC
TGSQGEPRAALSRIANSDHPQVTLNKGDTVIFSSRTIPGNEKSVGTIINGLVTQGVEVIT
DRTHLVHVSGHPRRDELRDMISWVRPQLLIPVHGEALHLHEHAKLARACGVPKTMIVKAG
DLVRLGPGDSAVIDQLPSGRLYKDGAILEDSKSRAVTERKRLSFAGCAFIAIAVSEKGDL
VNDPELDLVGIPEKNVKGELIDDIVFDVVVNTVENLPKARKRDPDAMAESIRRAVRSCVS
EHWGKKTLCYVHILTV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacccgacgaattgacttttgcatcgcttggcggtgttggcgagatcggcatg
aacctgtcgatctacgggctcggcaagggcaaccagcgcagctggctggcggtcgatctc
ggcgtctactttggcgacgaggagcacctgccaggcatcgacctggtgatgcccgacatc
aagttcctggaaaaggaaaagaagaacctcgtcggcctggtgctgacccacgcccatgaa
gatcatttcggcgccatcatcgacctgtggccgaagctgaaatgcccgatctacgcgacc
cagttcagtgcctctctgttcgcggccaaatgcgccagcgagcgcaacccgccgaagatc
ccggtcaccgtggtgccgtcgggcggcaccatccagctcggtccgttcagcgtcgaattc
atccccgtcgcgcattcgattccggaatcccacgcgctcgccatccacacctcggtcggc
accgtgctgcacaccggcgactggaagatcgatccgaccccgatcatcggcaagcccacc
gacgaacgccgcctgcgcgagctcggcgaccagggcgtgctggcgctgatcggcgattcc
accaatgccgtcagggaagggcgctcgccctccgagatggaagtcgccaagaccatcacc
gagctgatgaaggccgccaagggccgcgtcgccgtcaccaccttcgcctccaacgtcgcc
cggctgcgcgccgtggccgatgccgccgaggcgtccggccgcgaggtcgtcgtggtcggc
cgtgccatggaacgtgtggtccaggtggcgcgcgagaccggctatctcgagggcgtccgc
gccttccgcagcgccgactactacggccatttccccgccgacaaggttgtcgcgctgtgc
accggcagccaaggcgaaccgcgcgccgcattgtcgcgcatcgccaactcggatcatccg
caggtcaccctcaacaagggcgacacggtgatcttctcgtcgcgcaccattccgggcaac
gagaagtcggtcggcaccatcatcaacggcctggtcacccagggcgtcgaggtcatcacc
gaccgcacccatctggtgcacgtctccggccatccgcgccgcgacgagctgcgcgacatg
atctcgtgggtccgtccgcagctcttgatcccggtccacggcgaagcgctgcatctgcat
gagcacgccaagctggcgcgtgcctgcggcgtgccgaagaccatgatcgtcaaggccggc
gacctggtgcggctcggacccggcgactccgcggtgatcgaccagttgccgtcgggccgg
ctctacaaggacggcgccatcctcgaggattccaagtcgcgcgcggtgaccgagcgcaag
cggctgtcgttcgccggctgcgccttcatcgctattgccgtgagcgagaagggcgacctc
gtcaacgatcccgaactggatctggtcggcatccccgagaagaacgtcaagggcgagctg
atcgacgacatcgtgttcgacgtcgtggtgaacaccgtcgagaacctgcccaaggcgcgc
aagcgcgaccccgatgccatggcggaatcgatccgccgcgcggtgcgctcctgcgtgtcc
gagcactggggcaagaagacgctgtgctacgttcacatcctgacggtctag
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