KEGG   Rhodopseudomonas sp. P2A-2r: ONR75_19825
Entry
ONR75_19825       CDS       T10299                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rhor  Rhodopseudomonas sp. P2A-2r
Pathway
rhor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ONR75_19825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhor03019]
    ONR75_19825
Messenger RNA biogenesis [BR:rhor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ONR75_19825
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: UZE52224
LinkDB
Position
complement(4099246..4100916)
AA seq 556 aa
MTRPDELTFASLGGVGEIGMNLSIYGLGKGNQRSWLAVDLGVYFGDEEHLPGIDLVMPDI
KFLEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSASLFAAKCASERNPPKI
PVTVVPSGGTIQLGPFSVEFIPVAHSIPESHALAIHTSVGTVLHTGDWKIDPTPIIGKPT
DERRLRELGDQGVLALIGDSTNAVREGRSPSEMEVAKTITELMKAAKGRVAVTTFASNVA
RLRAVADAAEASGREVVVVGRAMERVVQVARETGYLEGVRAFRSADYYGHFPADKVVALC
TGSQGEPRAALSRIANSDHPQVTLNKGDTVIFSSRTIPGNEKSVGTIINGLVTQGVEVIT
DRTHLVHVSGHPRRDELRDMISWVRPQLLIPVHGEALHLHEHAKLARACGVPKTMIVKAG
DLVRLGPGDSAVIDQLPSGRLYKDGAILEDSKSRAVTERKRLSFAGCAFIAIAVSEKGDL
VNDPELDLVGIPEKNVKGELIDDIVFDVVVNTVENLPKARKRDPDAMAESIRRAVRSCVS
EHWGKKTLCYVHILTV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgacgcgacccgacgaattgacttttgcatcgcttggcggtgttggcgagatcggcatg
aacctgtcgatctacgggctcggcaagggcaaccagcgcagctggctggcggtcgatctc
ggcgtctactttggcgacgaggagcacctgccaggcatcgacctggtgatgcccgacatc
aagttcctggaaaaggaaaagaagaacctcgtcggcctggtgctgacccacgcccatgaa
gatcatttcggcgccatcatcgacctgtggccgaagctgaaatgcccgatctacgcgacc
cagttcagtgcctctctgttcgcggccaaatgcgccagcgagcgcaacccgccgaagatc
ccggtcaccgtggtgccgtcgggcggcaccatccagctcggtccgttcagcgtcgaattc
atccccgtcgcgcattcgattccggaatcccacgcgctcgccatccacacctcggtcggc
accgtgctgcacaccggcgactggaagatcgatccgaccccgatcatcggcaagcccacc
gacgaacgccgcctgcgcgagctcggcgaccagggcgtgctggcgctgatcggcgattcc
accaatgccgtcagggaagggcgctcgccctccgagatggaagtcgccaagaccatcacc
gagctgatgaaggccgccaagggccgcgtcgccgtcaccaccttcgcctccaacgtcgcc
cggctgcgcgccgtggccgatgccgccgaggcgtccggccgcgaggtcgtcgtggtcggc
cgtgccatggaacgtgtggtccaggtggcgcgcgagaccggctatctcgagggcgtccgc
gccttccgcagcgccgactactacggccatttccccgccgacaaggttgtcgcgctgtgc
accggcagccaaggcgaaccgcgcgccgcattgtcgcgcatcgccaactcggatcatccg
caggtcaccctcaacaagggcgacacggtgatcttctcgtcgcgcaccattccgggcaac
gagaagtcggtcggcaccatcatcaacggcctggtcacccagggcgtcgaggtcatcacc
gaccgcacccatctggtgcacgtctccggccatccgcgccgcgacgagctgcgcgacatg
atctcgtgggtccgtccgcagctcttgatcccggtccacggcgaagcgctgcatctgcat
gagcacgccaagctggcgcgtgcctgcggcgtgccgaagaccatgatcgtcaaggccggc
gacctggtgcggctcggacccggcgactccgcggtgatcgaccagttgccgtcgggccgg
ctctacaaggacggcgccatcctcgaggattccaagtcgcgcgcggtgaccgagcgcaag
cggctgtcgttcgccggctgcgccttcatcgctattgccgtgagcgagaagggcgacctc
gtcaacgatcccgaactggatctggtcggcatccccgagaagaacgtcaagggcgagctg
atcgacgacatcgtgttcgacgtcgtggtgaacaccgtcgagaacctgcccaaggcgcgc
aagcgcgaccccgatgccatggcggaatcgatccgccgcgcggtgcgctcctgcgtgtcc
gagcactggggcaagaagacgctgtgctacgttcacatcctgacggtctag

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