KEGG   Rhodococcus sp. M8-50: QWW67_01540
Entry
QWW67_01540       CDS       T10459                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rhos  Rhodococcus sp. M8-50
Pathway
rhos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QWW67_01540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhos03019]
    QWW67_01540
Messenger RNA biogenesis [BR:rhos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QWW67_01540
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 TPR_DNAAF5 Peptidase_M16_C
Other DBs
NCBI-ProteinID: WVN70853
LinkDB
Position
335813..337630
AA seq 605 aa
MSRPSRGRGRATRNAGPPSGRPARRTVQTSANTQRPDPRKVADMSGRLGTPPKAPPKGLR
VVALGGIGEIGRNMTVFEHQGRLLVIDCGVLFPEDQQPGVDLILPDFRHIEDRMDDVEAV
VLTHGHEDHIGAVPFLLRLRPDIPVVGSKFTLALVAAKCREHRLRPNLVEVVEGDKTTHG
PFECEYFAVNHSIPDALAVAVRTEAGLVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVD
LFLVDSTNAEVPGFVMPEREIGGVLDNVIGKATQRVIVASFASHVHRIQQVVDVAGRYNR
RIAFVGRSMVRNMQIAQDLGYLRVPDGLVVDLDTAATLPDNRLVLISTGSQGEPLSALSR
MARGEHRQINIKADDLVILASSLIPGNENSVFAVVNGLAKRGATVVTQQNAKVHVSGHAS
AGELLYLYNAVRPTNAMPVHGEWRHLRANAALAEATGVPRDRIVLAEDGVVVDLVDGLAE
IVGQVPVGHVYVDGLSVGDVGESTLSDRLILGEGGFISISVAVDENGRAVSTPGVSGRGF
SDDPGALSEAAQLVDKVLNELAAEGIDDAHRIAQAIRRVVGRWVSDTYRRRPMIVPTVIT
VPGPA
NT seq 1818 nt   +upstreamnt  +downstreamnt
gtgagccgcccgtcgcgcggccggggccgcgccacccgcaacgccggaccgcccagcggc
cggcccgcgcgccggaccgtgcagacctcggccaacacccagcggcccgatccgcgcaag
gtggcggacatgtcggggcgcctcggcaccccgccgaaggcgccgccgaagggcctgcgc
gtcgtcgcgctcggcggcatcggcgaaatcggccgcaacatgacggtcttcgagcatcag
ggccggctcctcgtcatcgactgcggcgtgctcttccccgaggaccagcagcccggcgtc
gacctgatcctgccggacttccggcacatcgaggaccgcatggacgacgtcgaagccgtc
gtcctcacccacggacacgaggatcacatcggggcggtgccgttcctgctgcgcctgcgt
cccgacatcccggtcgtgggctcgaagttcaccctcgcgctcgtcgccgcgaaatgccgc
gagcaccggctgcggcccaacctcgtcgaagtcgtcgagggggacaagaccacgcacggc
ccgttcgagtgcgagtacttcgccgtcaaccactcgatcccggacgcgctcgccgtcgcc
gtccgcaccgaggccgggctcgttctgcacaccggcgacatcaagctcgaccagttgccg
ctcgacggccgcctcaccgacctcgccggattctcccggctcggcgacgagggcgtcgac
ctgttcctcgtcgactccaccaacgccgaggtgccgggcttcgtgatgcccgaacgcgag
atcggcggcgtcctggacaacgtcatcggcaaggccacccagcgcgtgatcgtcgcgtcc
ttcgccagccacgtgcaccgcatccagcaggtcgtcgacgtcgccgggcggtacaaccgc
cgcatcgccttcgtcggacggtcgatggtgcgcaacatgcagatcgcgcaggacctcggc
tacctgcgggtgccggacgggctcgtcgtcgatctcgacaccgccgcgacattgcccgac
aaccggctcgtgctgatctccaccggctcgcagggtgaaccgctgtccgcgctgtcgcgc
atggcgcgcggcgagcaccgccagatcaacatcaaggccgacgatctcgtcatcctggct
tcctccctgatcccgggcaacgagaattcggtgttcgcggtcgtcaacggcctcgccaag
cgaggcgccaccgtcgtcacccagcagaacgcgaaggtgcacgtctccggccacgcctcc
gcgggcgagctgctgtacctgtacaacgcggtgcgcccgacgaatgcgatgccggtgcac
ggcgaatggcggcacctgcgggccaacgcggcgctggccgaagcgaccggggtgccgcgg
gaccggatcgtgctcgccgaggacggcgtggtcgtcgacctcgtcgacgggctcgcggag
atcgtcggacaggtacccgtcggccacgtctacgtcgacggcctgtccgtcggtgacgtc
ggcgaatcgaccctgtcggaccggttgatcctcggcgagggcggcttcatctccatctcc
gtcgccgtggacgagaacggtcgcgccgtgagcaccccgggggtgtccggccgcggcttc
tccgacgacccgggagcgctctccgaggccgcgcaactcgtggacaaggtcctcaacgag
ctcgccgccgagggtatcgacgacgcccaccgcatcgcccaggcgatccgccgtgtcgtc
gggcgctgggtgtccgacacctaccgtcgccggccgatgatcgtgccgacggtgatcacc
gtcccgggcccggcgtag

DBGET integrated database retrieval system