Rhodococcus sp. M8-50: QWW67_01540
Help
Entry
QWW67_01540 CDS
T10459
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWW67_01540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhos03019
]
QWW67_01540
Messenger RNA biogenesis [BR:
rhos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QWW67_01540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
TPR_DNAAF5
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
WVN70853
LinkDB
All DBs
Position
335813..337630
Genome browser
AA seq
605 aa
AA seq
DB search
MSRPSRGRGRATRNAGPPSGRPARRTVQTSANTQRPDPRKVADMSGRLGTPPKAPPKGLR
VVALGGIGEIGRNMTVFEHQGRLLVIDCGVLFPEDQQPGVDLILPDFRHIEDRMDDVEAV
VLTHGHEDHIGAVPFLLRLRPDIPVVGSKFTLALVAAKCREHRLRPNLVEVVEGDKTTHG
PFECEYFAVNHSIPDALAVAVRTEAGLVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVD
LFLVDSTNAEVPGFVMPEREIGGVLDNVIGKATQRVIVASFASHVHRIQQVVDVAGRYNR
RIAFVGRSMVRNMQIAQDLGYLRVPDGLVVDLDTAATLPDNRLVLISTGSQGEPLSALSR
MARGEHRQINIKADDLVILASSLIPGNENSVFAVVNGLAKRGATVVTQQNAKVHVSGHAS
AGELLYLYNAVRPTNAMPVHGEWRHLRANAALAEATGVPRDRIVLAEDGVVVDLVDGLAE
IVGQVPVGHVYVDGLSVGDVGESTLSDRLILGEGGFISISVAVDENGRAVSTPGVSGRGF
SDDPGALSEAAQLVDKVLNELAAEGIDDAHRIAQAIRRVVGRWVSDTYRRRPMIVPTVIT
VPGPA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcccgtcgcgcggccggggccgcgccacccgcaacgccggaccgcccagcggc
cggcccgcgcgccggaccgtgcagacctcggccaacacccagcggcccgatccgcgcaag
gtggcggacatgtcggggcgcctcggcaccccgccgaaggcgccgccgaagggcctgcgc
gtcgtcgcgctcggcggcatcggcgaaatcggccgcaacatgacggtcttcgagcatcag
ggccggctcctcgtcatcgactgcggcgtgctcttccccgaggaccagcagcccggcgtc
gacctgatcctgccggacttccggcacatcgaggaccgcatggacgacgtcgaagccgtc
gtcctcacccacggacacgaggatcacatcggggcggtgccgttcctgctgcgcctgcgt
cccgacatcccggtcgtgggctcgaagttcaccctcgcgctcgtcgccgcgaaatgccgc
gagcaccggctgcggcccaacctcgtcgaagtcgtcgagggggacaagaccacgcacggc
ccgttcgagtgcgagtacttcgccgtcaaccactcgatcccggacgcgctcgccgtcgcc
gtccgcaccgaggccgggctcgttctgcacaccggcgacatcaagctcgaccagttgccg
ctcgacggccgcctcaccgacctcgccggattctcccggctcggcgacgagggcgtcgac
ctgttcctcgtcgactccaccaacgccgaggtgccgggcttcgtgatgcccgaacgcgag
atcggcggcgtcctggacaacgtcatcggcaaggccacccagcgcgtgatcgtcgcgtcc
ttcgccagccacgtgcaccgcatccagcaggtcgtcgacgtcgccgggcggtacaaccgc
cgcatcgccttcgtcggacggtcgatggtgcgcaacatgcagatcgcgcaggacctcggc
tacctgcgggtgccggacgggctcgtcgtcgatctcgacaccgccgcgacattgcccgac
aaccggctcgtgctgatctccaccggctcgcagggtgaaccgctgtccgcgctgtcgcgc
atggcgcgcggcgagcaccgccagatcaacatcaaggccgacgatctcgtcatcctggct
tcctccctgatcccgggcaacgagaattcggtgttcgcggtcgtcaacggcctcgccaag
cgaggcgccaccgtcgtcacccagcagaacgcgaaggtgcacgtctccggccacgcctcc
gcgggcgagctgctgtacctgtacaacgcggtgcgcccgacgaatgcgatgccggtgcac
ggcgaatggcggcacctgcgggccaacgcggcgctggccgaagcgaccggggtgccgcgg
gaccggatcgtgctcgccgaggacggcgtggtcgtcgacctcgtcgacgggctcgcggag
atcgtcggacaggtacccgtcggccacgtctacgtcgacggcctgtccgtcggtgacgtc
ggcgaatcgaccctgtcggaccggttgatcctcggcgagggcggcttcatctccatctcc
gtcgccgtggacgagaacggtcgcgccgtgagcaccccgggggtgtccggccgcggcttc
tccgacgacccgggagcgctctccgaggccgcgcaactcgtggacaaggtcctcaacgag
ctcgccgccgagggtatcgacgacgcccaccgcatcgcccaggcgatccgccgtgtcgtc
gggcgctgggtgtccgacacctaccgtcgccggccgatgatcgtgccgacggtgatcacc
gtcccgggcccggcgtag
DBGET
integrated database retrieval system