Rhodococcus sp. M8-50: QWW67_01725
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Entry
QWW67_01725 CDS
T10459
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos00300
Lysine biosynthesis
rhos00470
D-Amino acid metabolism
rhos01100
Metabolic pathways
rhos01110
Biosynthesis of secondary metabolites
rhos01120
Microbial metabolism in diverse environments
rhos01230
Biosynthesis of amino acids
Module
rhos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QWW67_01725 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QWW67_01725 (dapF)
Enzymes [BR:
rhos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QWW67_01725 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Ago_N_2
Motif
Other DBs
NCBI-ProteinID:
WVN70888
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Position
373056..373922
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AA seq
288 aa
AA seq
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MDFSKGHGTENDFVILPDPDVRISLEPKRVAALCDRRRGLGADGVLRVARAGALVDAGVL
PALPEGTDADDWFMDYRNADGSIAEMCGNGVRVFAHFVTASGLESRGEFVVGSRAGGKPV
QVHSADATHGEVTVDMGVVRELGESTATIEGRVYRGLGIDVGNPHLACVDPHLTAATLAA
LDLSGPGFDPGFFPQGVNIEFLTPISAGAVDMRVYERGVGETRSCGTGTVAAAAAALRFD
GSGSGTVQVHVPGGTVQVRLEDGRAALRGPSVLVASGTIGDDWWGGLD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcaagggccacggcaccgagaacgacttcgtgatcctcccggatcccgac
gtgcggatctccctcgagccgaagcgggtggcggcgctgtgcgaccgccgtcgcggcctc
ggggcggacggggtcctgcgcgtcgcgcgcgccggggccctggtcgacgccggggttctg
ccggcactgcccgaggggacggacgccgacgactggttcatggactaccgcaacgccgac
ggctcgatcgcggagatgtgcggcaacggggtgcgggtgttcgcgcacttcgtcaccgcc
agcgggctcgagtcgcgcggcgagttcgtcgtcggcagccgcgccggcggcaagccggtg
caggtgcacagcgccgacgccacccacggcgaggtcaccgtcgacatgggtgtggtgcgg
gagctgggggagtcgacggccaccatcgagggccgggtgtaccgcgggctgggcatcgac
gtcggcaacccgcacctggcctgtgtcgatccgcacctgaccgcggcgaccctggccgcc
ctcgacctttccggtccgggtttcgaccccggcttcttcccgcagggggtcaacatcgag
ttcctcacgcccatctccgcgggcgcggtggacatgcgggtgtacgagcggggcgtgggg
gagacccggtcctgcggcaccggcacggtcgcggccgccgccgcggcgttgcgtttcgac
gggtccggctccggtacggtccaggtgcacgtccccggcgggaccgtgcaggtgcgcctc
gaggacggccgggccgcgttgcgcggcccgtcggtgctggtggcgtcgggcacgatcggc
gacgactggtggggcggcctggactga
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