Rhodococcus sp. M8-50: QWW67_05240
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Entry
QWW67_05240 CDS
T10459
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos03030
DNA replication
rhos03430
Mismatch repair
rhos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWW67_05240
03430 Mismatch repair
QWW67_05240
03440 Homologous recombination
QWW67_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhos03032
]
QWW67_05240
03400 DNA repair and recombination proteins [BR:
rhos03400
]
QWW67_05240
Enzymes [BR:
rhos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWW67_05240
DNA replication proteins [BR:
rhos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWW67_05240
DNA repair and recombination proteins [BR:
rhos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWW67_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WVN73172
LinkDB
All DBs
Position
1179864..1181609
Genome browser
AA seq
581 aa
AA seq
DB search
MQLGFDELDTPLRETTFVVVDLETTGGSSTDDAITEIGAVKIRGGEVLGEFATLVDPGRS
IPPNIVQLTGITTAMVRAAPRIEQVLPSFLEFAAGSVLVAHNAGFDVGFLRAAASRSEVA
WPRFQVLCTVKLARRVLGRDEAPSVRLSALAELFRVSTTPTHRALDDARATVDVLHALID
RVGNQGVHSLTELRDYLPAVTAEQRAKRSLAAHLPRRPGVYLFRGPSDEVLYIGTAVDLR
RRVRKYFTGSETRPRLKEMVALTTRIDHVECAHALEAGVRELRLLAAHAPPYNRRSKFPS
RGWWITLTDEAFPRLSVVRTPTTAPPAPTCGGPTDAVGPFSSRADAVAVATTVAEFCLLR
TCTRRIPRTKRHGEHCPPEAVGACAAAAAGLQTPVEYARQVDLARALLRGEDDAPLHRMR
ERIDHLGAAELFESAARLRDRAADAVFALRRTQRLAALAAVDELIAARRRAEGGWEFAVI
RAGRLAAAGVAPRGVPPMPVVDAIAAAAETVRPTTAPLRGALVEELGLLARWLHDDGVRI
VRTTQGWSEPLRGAGAWAQWGELARTARAGAEPVTIAHPLR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctcggtttcgacgaattggacacgccgctgcgggagaccaccttcgtcgtcgtc
gatctcgagaccaccggcggcagctccacggacgacgcgatcacggagatcggggcggtc
aagatccgcggcggcgaggtgctcggcgagttcgccacgctcgtcgacccgggccggtcg
atccccccgaacatcgtgcagctcaccggcatcacgaccgccatggtccgtgccgcgccc
cggatcgagcaggtcctgccctcgttcctcgagttcgccgccggatccgtgctcgtcgcg
cacaacgcgggcttcgacgtgggattcctgcgggccgcggcgtcccggtccgaggtcgcg
tggccccgcttccaggtactgtgcacggtcaagctcgcgcgccgcgtcctcggccgggac
gaggcaccgtccgtgcggctgtccgcgctcgccgagctgttccgggtgtccaccacaccc
acgcaccgcgccctcgacgacgcccgggcaaccgtcgacgtcctgcacgcgctcatcgac
cgcgtcggcaaccaaggggtacacagcctcaccgaactgcgggactatctgccggccgtc
accgccgagcaacgcgccaaacggtccctcgcggcgcacctgccgcggcggcccggcgtg
tacctgttccgcgggccctcggacgaggtgctgtacatcgggaccgcggtcgacctgcgc
cgccgcgtgcgcaagtacttcaccggatccgagacccggccccgcctgaaggagatggtg
gcactcaccacccggatcgatcacgtcgagtgcgcccacgccctcgaggccggggtgcgg
gagctgcggctgctcgccgcgcacgccccgccctacaaccgtcgctccaagttccccagc
cggggctggtggatcaccctcacggacgaggcgttcccccggctgtccgtcgtccgcaca
ccgaccacggcgcccccggcgccgacgtgcggcggcccgaccgacgccgtcggcccgttc
tcgtcgcgggccgacgccgtcgccgtcgccaccaccgtcgccgagttctgcctgctgcgg
acctgcacccggcgcatcccccgcacgaaacggcacggcgagcactgccctccggaggcc
gtgggggcctgcgccgccgccgcggccgggctgcagacccccgtcgagtacgcgcggcag
gtggacctcgcccgggcgctgctgcgcggggaggacgacgcgccgctgcatcggatgcgc
gagcgcatcgaccatctcggcgccgccgaactgttcgagagcgcggcccggctgcgggac
cgggcggccgacgccgtgttcgcgctgcgccggacgcagcgcctggccgccctcgcggcg
gtggacgagctgatcgccgcccgccgacgcgccgaagggggctgggagttcgcggtgatc
cgggccggccggctcgcggcagcgggagtcgctccacgcggcgtcccgccgatgcccgtc
gtcgacgcgatcgccgccgcggccgagaccgtgcgcccgacgaccgcgccgctgcggggt
gcgctcgtcgaggaactgggactgctggcccgctggctccacgacgacggagtccgcatc
gtccggaccacccagggctggtccgagccgctccgcggcgccggggcgtgggcgcagtgg
ggtgagctcgcccgaacggcacgcgccggggccgagccggtcacgatcgcgcacccccta
cgctga
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