Rhodococcus sp. M8-50: QWW67_08655
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Entry
QWW67_08655 CDS
T10459
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QWW67_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhos03021
]
QWW67_08655
03400 DNA repair and recombination proteins [BR:
rhos03400
]
QWW67_08655
Enzymes [BR:
rhos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QWW67_08655
Transcription machinery [BR:
rhos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWW67_08655
DNA repair and recombination proteins [BR:
rhos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWW67_08655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WVN72138
LinkDB
All DBs
Position
complement(1959005..1962976)
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDELRHNELSTLEAEMEVEKKSVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLEEIWNTFTKLKPKDLIVDELL
YRELQDRYGEYFTGAMGAESIQKLIENFDIDAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVINEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGRPLAMPRLDMVTGLFHLTRLVEDAPGAYR
PATDDEPEQGVYSSPAEAIMAVDRGVLSVQAPIKVRLTRQRPPKDVEAELFPDGWNYGDG
WTVQTTLGRVLFNELLPVNYGFVNDVMPKKRQAAIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPEKKEILERYEASADQLERKFARGALSKEERRDSLVKLWQEA
TEEVGQAMEAHYPDDNPIPTIVKSGAAGNMTQIRSLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTPRGIEMVI
AEPERDGAGNETGRLVRDAHIETSTYARTLATDAVDADGNVVVTRGSDLGDPAIEALLAA
GIRKVKVRSVLTCDTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTF
HQGGVGEDITGGLPRVQELFEARVPKGKAPIADVSGRVRLEDDDRFYKITIVPDDGGEEV
VYDKLSKRQRLHVIRKANGTEGILADGDHVEVGQQLLEGAADPHEVLRVMGPRQVQVHLV
NEVQEVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLVERSEFEASNRRVVA
EGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIG
KLIPAGTGINRYRNIQVQPTEEARAAAYAIPSYEDQYYSPEGFGQNTGAAVPLDDYGYSS
DYR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgcatcggcctggccactgcggaggacatc
cgcaactggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcgcatgggccacatcgagctcgccgcgccg
gtcacgcacatctggtacttcaagggtgtgccgagccgcctcggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacgtcatcacggcggtggac
gacgagctgcgccacaacgagctctcgaccctcgaggccgagatggaggtcgagaagaag
tccgtcgccgatcagcgcgacgccgacctcgaggcccgcgcgcagaagctcgaggccgac
ctggccgagctcgaggcggagggtgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgtgagctggaccggctcgag
gagatctggaacaccttcaccaagctcaagccgaaggacctgatcgtcgacgagctgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgcgatgggtgccgagtcg
atccagaagctcatcgagaacttcgacatcgacgccgaggccgagtcgctgcgcgagacc
atccgcagcggcaagggccagaagaagctgcgcgccctgaagcgactgaaggtcgtcgcg
gcgttccagcagtccggtaactcgcccatgggcatggttctcgatgcggtgccggtgatc
ccgccggagctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ttgttcgacaacggccgtcgtggccggccggtcaccggcccgggcaaccgtccgctgaag
tcgctgtccgacctcctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcggcagcgc
ccgcaggtgtgggacgtcctcgaagaggtcatcaacgagcaccccgtgctgctcaaccgt
gctcccacgctgcaccgcctcggtatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcgtgctgatgctg
tcgtcgaacaacatcctgtcgccggcgtcgggtcgtccgctcgccatgccgcgtctggac
atggtgaccggtctgttccacctgacccgcctggtcgaggacgcgccgggcgcgtaccgg
ccggccaccgacgacgagccggagcagggcgtgtactcgtccccggccgaggccatcatg
gccgtcgaccgcggcgtgctctcggtgcaggccccgatcaaggtgcgcctgacgcggcag
cgcccgccgaaggacgtcgaggccgagctgttccccgacggctggaactacggtgacggc
tggaccgtgcagaccacgctcggtcgcgtgctgttcaacgagctgctgccggtgaactac
ggcttcgtcaacgacgtcatgccgaagaagcgtcaggccgcgatcatcaacgatctggcc
gagcgttacccgatgatcgtcgtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccactcgttcgggtgtcaccgtgtcgatggccgacgtgctggtgccgccggag
aagaaggagatcctcgagcgctacgaagcgtccgcggatcagctcgagcgcaagttcgct
cgtggtgccctctcgaaggaggagcggcgcgactcgctcgtcaagctgtggcaggaggcg
accgaagaggtcggtcaggccatggaggcgcactacccggacgacaacccgatcccgacg
atcgtgaagtccggcgccgcgggcaacatgacccagatccgctcgctcgcgggcatgaag
ggtctggtgacgaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgaccgtgctcgagtacttcatcaacacccacggtgcccgtaagggtctggcc
gacaccgcgctccgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgtccgcgagaccgactgcggcaccccgcgcggtatcgagatggtcatc
gccgagcccgagcgcgacggcgcgggcaacgagaccggccgcctggtgcgcgacgcccac
atcgagaccagcacgtacgcccgtacgctggccaccgatgcggtcgacgcggacggcaac
gtcgtcgtcacccggggcagcgacctcggcgacccggcgatcgaggccctgctggccgcc
ggcatccggaaggtcaaggtccgctccgtgctgacctgcgacaccggcaccggcgtgtgc
gccacctgctacggccgctcgatggcgaccggcaagctcgtcgacatcggcgaggccgtc
ggtatcgtcgccgcgcagtcgatcggtgagcccggtacgcagctgacgatgcgtacgttc
caccagggtggcgtcggtgaggacatcaccggcggtctgccgcgagtgcaggagctgttc
gaggcccgcgtcccgaagggcaaggcgcccatcgccgacgtctccggccgcgtgcgcctc
gaggacgacgaccgcttctacaagatcaccatcgtcccggacgacggcggcgaggaggtc
gtgtacgacaagctgtcgaagcgtcagcgtctgcacgtgatccgcaaggcgaacggcacc
gagggcatcctcgccgacggcgaccacgtggaggtcggtcagcagctcctcgagggtgct
gccgatccgcacgaggtgctgcgtgtcatgggtccgcgtcaggtgcaggtccacctcgtg
aacgaggttcaggaggtgtaccgcagccagggtgtgtcgatccacgacaagcacatcgag
gtcatcgtgcgccagatgctgcgtcgcgtcacgatcatcgactcgggttcgacggagttc
ctgcccggttcgctggtcgagcgcagcgagttcgaggcctccaaccggcgggtcgtcgcc
gagggcggcgagccggctgccggtcgtcccgtgctcatgggtatcaccaaggcgtcgctg
gccaccgattcgtggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgac
gcggcgatcaactgccgctcggacaagctgatcggtctgaaggagaacgtgatcatcggc
aagctgatcccggccggcaccggcatcaaccggtaccggaacatccaggtgcagccgacc
gaggaggcccgcgcggccgcgtacgcgatcccgtcgtacgaggatcagtactactcgccg
gagggcttcggccagaacaccggcgctgcggttccgctcgacgattacggttactccagc
gactaccggtag
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integrated database retrieval system
