Rhodococcus sp. M8-50: QWW67_24270
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Entry
QWW67_24270 CDS
T10459
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QWW67_24270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhos03400
]
QWW67_24270
Enzymes [BR:
rhos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QWW67_24270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QWW67_24270
DNA repair and recombination proteins [BR:
rhos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QWW67_24270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
DprA_WH
DUF7129
TMEM106_N
RNHCP
DUF5795
Motif
Other DBs
NCBI-ProteinID:
WVN69857
LinkDB
All DBs
Position
complement(5310251..5311117)
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AA seq
288 aa
AA seq
DB search
MPELPEVEALAVFLREHAVGAVVGRIDVAALSVLQTADPPITVLQGRNVTGVSRFGKFLA
VDCAGLWLVTHLSRAGWLRWQDNPSPAPPKLGRGPLALRVHLFTPDAATPAFDLTEAGTR
KRLAVWIADRPQQVPGIARLGPDALAVTADELAARLAGSTARLKTALTDQQVLAGIGNAY
SDEILHVARLSPFAPAGRLTDEQRQALYDALRTVLLDAVSRSVGQDAARLKGEKQSGMRV
HARTGLPCPECGDTVREVAYAERSFQYCPTCQTGGKILADRRLSRLVK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtggaggccctggcggtgttcctgcgcgagcacgccgtcggt
gccgtcgtcggccggatcgacgtggcggcgctcagtgtcctgcagaccgccgacccgccg
atcaccgtgctgcagggccgcaacgtcaccggcgtgtcccgcttcgggaagttcctggcc
gtcgactgcgccggtctgtggctcgtcacgcacctgtcgcgggcggggtggctgcgctgg
caggacaacccgtcgccggcaccgccgaagctgggccgggggccgctcgcgctgcgggta
cacctgttcacccccgacgccgccacccccgccttcgacctcaccgaggccggcacccgc
aagcgcctcgccgtgtggatcgccgaccgtccgcagcaggtgcccggcatcgcccggctc
ggtcccgacgccctggccgtcaccgccgacgagctggccgcgcggctggcgggcagcacc
gcacgcctgaagaccgccctcaccgaccagcaggtgctcgccgggatcggcaacgcctac
tccgacgagatcctgcacgtcgcccggctgtcgccgttcgcgccggcgggccggctcacc
gacgagcagcggcaggcgctgtacgacgcgctgcgcacggtgctcctcgacgccgtgagc
cgttccgtgggccaggatgccgcgcggctcaagggtgagaagcagtccgggatgcgggta
cacgcccgcacgggcctgccgtgcccggagtgcggcgacaccgtccgcgaggtcgcctac
gccgaacgttccttccagtactgccccacgtgccagaccggcgggaagatcctcgcggac
cggcggctgtcgcggctggtcaagtga
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