Rhodococcus sp. M8-50: QWW67_27320
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Entry
QWW67_27320 CDS
T10459
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhos Rhodococcus sp. M8-50
Pathway
rhos03030
DNA replication
rhos03430
Mismatch repair
rhos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWW67_27320
03430 Mismatch repair
QWW67_27320
03440 Homologous recombination
QWW67_27320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhos03032
]
QWW67_27320
03400 DNA repair and recombination proteins [BR:
rhos03400
]
QWW67_27320
Enzymes [BR:
rhos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWW67_27320
DNA replication proteins [BR:
rhos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWW67_27320
DNA repair and recombination proteins [BR:
rhos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWW67_27320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
WVN70427
LinkDB
All DBs
Position
5942286..5944133
Genome browser
AA seq
615 aa
AA seq
DB search
MQVIDTLSHASGSRTLPKGHRWVVVDVETSGLRAYAHRVLSVAALVLREDGSVEREYSTL
VDPGCDPGPVHVHRLTRERLAGAPRFEQIAGELAEVLDGGTIVAHNAAFDYGFLDAEFRR
AGTEIPARQRLCTLALSRRLELDVPDHKLSTLAAHWQVQQLLEHDAYDDARVLSEVFVRS
ALLAESLQLPLPVVDCLSRRPAYPDSVPRVPCEWKNPGRLSLDVGLVQGMKVVVTGQTVT
PRVPLAGRMADAGLDVMNSVSRQTSVVVCNDPGVQTGKIRKAMAEGIPVVTEQQLEEMLT
RVIPGEPKMRPVVELAAPAAEPVIEPPPQAAPAEPLADVPSLPERMLTGQKPKLWQGRRV
LLLGGTHLDAVLMRSRLVQLGARPSLNLTAAVTDVLMLEGGDSDRRMPRITARELPVLTK
TDISAAVEKGVVPPHMRIESRISAPALARGEVIDLPARKTSWTVNVAWRAETDDFDVDVV
AFLLAEDEKVDSDDDFVFYNNPSAEDGAVELSIDGSSEQSVRFDLAALPDECARVAIAAA
IDGERTFGDLGAVSVSVDGEDGTAATFVLDAGTTERTMVLTEIYRRAGKWRLRAVGQGYD
DGLSGLVARYGVDAE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgatcgacacgctgtcgcacgcgtcgggttcgcggacgctgccgaagggccac
cgctgggtggtcgtcgacgtcgagacctccggcctgcgcgcctacgcgcatcgggtgctc
agcgtggccgcgctggtgttgcgggaggacggcagcgtcgagcgggagtactcgacgctc
gtcgacccgggttgcgaccccggcccggtccacgtgcaccggttgacgcgcgaacggctc
gccggagctccccgcttcgagcagatcgccggcgaactcgccgaggtgctggacggcggg
accatcgtcgcccacaacgcggccttcgactacggattcctcgacgccgagttccggcgc
gccggaaccgagatcccggccagacagcggttgtgcactctcgccctgtcgaggcggctc
gaactcgacgtgcccgatcacaaactctccaccctggccgcccactggcaggtccagcag
ttgctcgagcacgacgcctacgacgacgcccgcgtcctcagcgaggtcttcgtacgcagc
gccctgctcgccgagagcctgcagctcccgctgccggtggtcgactgcctcagccgcagg
cccgcctacccggactccgtgccgcgcgtgccgtgcgagtggaagaacccgggacgcctg
tcgctggacgtcggcctggtgcaggggatgaaggtggtcgtcacggggcagacggtgacg
ccgcgggtcccgctcgccggccggatggccgacgccggcctcgacgtgatgaactccgtc
agtcgccagacgagcgtggtcgtgtgtaacgaccccggcgtgcagacgggcaagatccgc
aaggcgatggccgagggcattcccgtcgtcaccgagcagcaactcgaagagatgctcacc
cgggtgattccaggcgaaccgaagatgcgtccggtggtcgagctggccgcgcccgctgct
gagcccgtgatcgaacctcctccgcaggcggcgcctgcggagcccctcgccgatgtaccg
agcctgcccgagcggatgctcacgggacagaagccgaagctgtggcagggccggcgggtg
ctgctcctcggcggcacccacctcgacgccgtgctcatgcgctcgcgtctcgtccagctc
ggtgcacgcccgtcgctcaacctcaccgcggcggtcacggacgtgctgatgctggaaggc
ggcgatagcgaccggcgcatgccgcgcatcaccgcgcgcgagctccccgtcctgaccaag
acggacatcagcgccgcggtggagaagggcgtcgtgccgccgcacatgcgcatcgagtcc
cgcatctccgcgccggcgctcgcccgaggcgaggtcatcgacctgccggcgcggaagacg
tcgtggacggtcaacgtcgcgtggcgcgccgagacggacgacttcgacgtcgacgtcgtc
gccttcctgctcgcggaagacgagaaggtcgacagcgacgacgacttcgtcttctacaac
aacccctccgccgaggacggcgcggtcgagctgtcgatcgacggcagcagcgaacagagc
gtgcggttcgacctggccgcgctgcccgacgaatgcgcgcgcgtcgcgatcgccgcggcc
atcgacggcgagcgcaccttcggcgacctcggggcggtgtcggtgagcgtggacggtgag
gacggcacggcggcgacgttcgtgctcgacgccggcaccaccgagcggaccatggtcctc
accgagatctatcggcgggcggggaagtggcggctgcgcgcggtggggcaggggtacgac
gacggcttgagtggtctggttgcgaggtacggcgtggacgccgagtag
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