Rhodococcus sp. 11-3: KZJ41_00685
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Entry
KZJ41_00685 CDS
T10209
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KZJ41_00685 (ltrA)
Enzymes [BR:
rhou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
KZJ41_00685 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
RVT_N
Intron_maturas2
Motif
Other DBs
NCBI-ProteinID:
USC15520
LinkDB
All DBs
Position
complement(155555..156952)
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AA seq
465 aa
AA seq
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MQAKLHRWAVADPGRRFDDLFNLVHDPATLIAAFDRVAGNRGAKTPGVDGRTIADVEEYV
GTPGFLNDLRASLKDGSFRPLPVRERIIPKPGGSGKVRRLGIPTVADRVVQAALKLVLEP
IFEADFEPVSFGFRPHRRAQDAIAEIHYYGTRGYRWVLDADIEACFDRIEHVALMDRVRL
RIKDKRVLALVKAFLKAGVLTELGDRRDTTTGTPQGGILSPLLANIALSVLDEHVMAPWK
PGGTMSTEGKRAYRRRTGSPTWRLVRYADDFVVLVHGTEDDTEAMREQVGEVLAPMGLRL
SPEKTRVRHLSDGVDFLGFHIRWRRKRGSDKWFVYTFIGDRPIRSLKAKVRALTHRQSQL
SLEYVIVRLNQILRGWSTYFKHAVAKDRFTALQHYVLQRVIRMLQTRHRWGWNDIRRRYT
TRTGRWLPISTADGTVLFDMASVTVTRYRWRGNTIPNRWTALRTA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaagcttcaccgttgggcggtggccgatcccggccgccggttcgacgacctg
ttcaacctggtgcacgacccagcgacgctgatcgcggcgttcgaccgggtcgcgggcaac
cgcggagcgaagactcccggcgtcgacggcaggaccatcgccgacgtcgaggaatacgtc
gggactccggggtttctgaacgacctacgcgccagcctgaaagatggttcgtttcgaccg
ttgccggtgcgggagaggatcattcccaagccgggcgggtcggggaaggtgcgccgcctc
ggaataccgacggtggcggaccgagtcgttcaggccgcgctcaagttggtgctggaaccg
atcttcgaggccgacttcgagccggtctcgttcgggttccggccccaccggcgggcgcag
gacgcgatagccgagatccactactacggcacccgcggttaccgctgggtgctggatgcg
gacatcgaggcgtgcttcgatcggatcgagcacgtcgcattgatggatcgtgtccggttg
cggatcaaggacaagcgggtcctggcgctggtcaaggcgttcctcaaggccggggttctc
accgaactcggcgatcggcgggacaccacgaccggcacgccccagggtggcatcctctcg
ccgttgttggccaacatcgcgttgagtgtgctcgacgagcacgtgatggcgccgtggaag
ccgggcggcacgatgtccaccgagggcaagcgggcataccgtcgccgcacagggtcaccg
acgtggcggctggtccgctacgccgacgacttcgtcgtcctcgtccacggaaccgaggac
gacaccgaggcgatgcgcgaacaggtcggcgaggttctcgcaccgatgggtctgcggctc
tcgccggagaaaacccgcgtgcgacacctcagcgacggggtcgacttcttgggattccac
atccggtggcgtcgcaagcgaggctcggacaagtggttcgtctacaccttcatcggcgac
cggcccatccggtcgttgaaggcgaaagtccgtgccctgacccatcggcagtcgcagctg
agtctggagtacgtgatcgtgcggctcaaccagattctgcgcggctggtccacctacttc
aagcatgccgtggcaaaagaccgcttcactgctttgcaacactacgtgttgcagcgggtg
atccggatgctgcaaacccggcatcgctgggggtggaacgatattcgccgccgatacact
acccgcactgggcggtggttacctatctcgacggcggacgggaccgtgttgttcgacatg
gccagcgtgacggtcacccgttaccgatggcgcggcaacacgatccccaaccgatggacg
gccctgcgaacagcgtga
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