Rhodococcus sp. 11-3: KZJ41_02320
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Entry
KZJ41_02320 CDS
T10209
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou03030
DNA replication
rhou03430
Mismatch repair
rhou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZJ41_02320
03430 Mismatch repair
KZJ41_02320
03440 Homologous recombination
KZJ41_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhou03032
]
KZJ41_02320
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_02320
Enzymes [BR:
rhou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZJ41_02320
DNA replication proteins [BR:
rhou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KZJ41_02320
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KZJ41_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_30
Mg_chelatase
AAA_19
Rad17
DnaX_C
AAA_16
AAA_14
DEAD
AAA_18
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
USC15797
LinkDB
All DBs
Position
520651..522840
Genome browser
AA seq
729 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSIALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CAEGPTSAPCGTCRSCVALGPGGGGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
IFIVDEAHMVTTQGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLPPP
VMRGLLEKICTQENVPVEDAVYPLVIRAGGGSPRDSLSVMDQLLAGAGEEGVTYSRALSL
LGVTDVALIDEAVDALAAGDGAGLFGTVEKVMDAGHDPRRFAVDLLERLRDLILMRSVPD
AADRGLVDAPGDVLERMREEADRIGPATLTRYAEIVHSGLGEMRGATAPRLLLEVMCARM
LLPAASGSESAVLQRLERLESGIAAPQGAAPRAVAPAPAAPTPPIAPEEPAARFQRPSQR
RAAPSSVAPVPEPAAEPAPVPPAESRPAAAAPAPVPPPAPAPPPTPAPPAREPEPAPRPV
VQEPEPAPRPVVQEHEPPAPRPAPRPQPEPAPAPAAGPDAAAVRAVWSEVRTKVRERSRT
VEVMLSGATVRSVEAGRIVLGHDSAPLVKRLVEPRNAAVIADALRAVFGVDFEVTCVQGA
ATPPTAAKPAPAQAGSRPSGQPRFSRPSQARQAQPAPQTRVTSPGAPPVPSRPEVDDIPP
PEAPDYPDDPGPEPDYEPPRISPADVTPEDEEEMFAEAATPGDPSTRREPEDVAIELLQD
ILGAKKISE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggccctctaccgtaagtaccgaccggcgacctttgccgaggtggtgggtcaggagcac
gtcaccgagcccctgagcatcgccctcgacgcaggtcgcatcaatcacgcgtatctgttc
tcgggcccgcgcggctgtggcaagacctcctcggcccggatcctggcccgctccctgaac
tgcgcggagggccccacgtcggccccgtgcgggacgtgccggtcctgcgtggcgctcggc
cccggcggtggcggcaacctcgacgtcatcgagctcgacgccgccagccacggcggcgtc
gacgacacccgcgaactacgcgaccgcgccttctacgcgccggccgagtcgcggtaccgc
atcttcatcgtcgacgaggcccacatggtcaccacgcagggcttcaacgctctgctcaag
atcgtcgaggagccgccggagcacctgatcttcgtgttcgccaccaccgaaccggagaag
gtgctgccgacgatccgctcgcgcacccaccactacccgttccggttgctgccgcccccc
gtcatgcgcgggctgctcgagaagatctgcacgcaggagaacgtgccggtcgaggacgcc
gtctacccgctggtgatccgtgcgggcggcggttcgccgcgcgactcgctgtcggtgatg
gaccagctcctcgccggcgccggcgaggagggcgtgacctacagccgtgcactctcgctg
ctcggcgtcaccgacgtcgccctcatcgacgaggccgtggacgccctcgccgccggcgac
ggtgcgggtctgttcgggaccgtcgagaaggtgatggatgccggccacgacccgcgacgg
ttcgcggtcgacctgctcgagcggctccgagatctcatcctgatgcgatcggtgcccgac
gccgccgatcgcggtctcgtcgacgccccgggcgacgtgctggagcggatgcgggaggaa
gccgaccggatcggtcccgccaccctgacccggtacgcggagatcgtgcactccggtctg
ggagagatgcgcggtgccacggccccgcgcctgctcctcgaggtgatgtgcgcgcggatg
ctgctgcccgccgcttcgggttcggaatcggctgtgctgcaacgcctcgagcgtctcgaa
agcgggatcgcggccccgcagggcgccgccccgcgggccgtcgctccggcgccggccgcg
cccacgccgccgatcgcccccgaagagccggccgcccgtttccagcgaccctcgcagcga
cgagccgcaccgtcctcggtcgcgcccgtccccgagcctgcggccgagccggcccccgtt
ccaccggcggagtcacgaccggccgccgcggcgccggcgcccgtgccaccgccggcgccc
gccccaccgccgacgcccgccccaccggcgcgcgaaccggagcctgcaccacgccccgtc
gtgcaggaaccggagcctgcaccgcgccccgtcgtgcaggaacacgagccgcccgcaccg
cgacccgcaccgcgaccccagccggagccggcgcccgcccccgccgccgggcccgacgcc
gccgccgtccgcgcggtatggtccgaggtccgtaccaaggtccgcgagcgcagccgcacc
gtcgaggtcatgctgtccggcgccacggtccgcagcgtcgaagcgggccgcatcgtgctc
ggtcacgattcggcccccctggtcaagaggctcgtcgaaccgcgcaacgccgcggtgatc
gccgacgccctgcgggcggtgttcggggtggacttcgaggtgacctgcgtgcagggcgct
gcgacaccccccaccgccgcgaaaccggccccggcgcaggcggggtcgcgcccttccggt
cagcctcggttctcccggcccagccaggcccggcaggcccagcccgccccgcaaacgcgc
gtgacgtcccccggcgcgcccccggttccgtcgcgtcccgaggtcgacgacatcccgccg
cccgaggcgccggactacccggacgaccccggtcccgagccggactacgagccgccgcgg
atcagccccgccgacgtcacccccgaggacgaggaagagatgttcgccgaggccgccacc
ccgggcgacccgtcgacgcggcgcgaaccggaggacgtggcgatcgagttgctgcaggac
atcctgggcgcgaagaagatcagcgagtga
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