Rhodococcus sp. 11-3: KZJ41_03330
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Entry
KZJ41_03330 CDS
T10209
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhou03032
]
KZJ41_03330 (topA)
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_03330 (topA)
Enzymes [BR:
rhou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KZJ41_03330 (topA)
DNA replication proteins [BR:
rhou03032
]
Prokaryotic type
DNA Topoisomerases
KZJ41_03330 (topA)
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KZJ41_03330 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
USC15975
LinkDB
All DBs
Position
727532..730465
Genome browser
AA seq
977 aa
AA seq
DB search
MAARDNSTSNGSSGTRRLVIVESPTKAKKIAPYLGRDYVVEASVGHIRDLPRGAADVPAK
YKGESWARLGVNVDHGFEPLYVVSPEKKSKVTELKGLLKDADELYLATDPDREGEAIAWH
LLETLKPKVPVRRMVFHEITEPAIRAAAEHTRDLDNNLVDAQETRRILDRLYGYEVSPVL
WKKVMPRLSAGRVQSVATRVIVQRERERMAFRSATYWDIAATLDAGADASPRSFGARLVG
VDGARVAAGRDFGPDGQLKSTGVVVLDEAYARRLAEALHGVDLTVTSVESKPYTRKPYAP
FMTSTLQQEAGRKLRFSSERTMRIAQRLYENGYITYMRTDSTTLSESAISAARAQATELY
GAQYVHPTPRQFTRKVKNAQEAHEAIRPAGDVFATPGELHSRLDTDEYRLYELIWQRTVA
SQMADARGTTLTLRITGTAASGEECTFSSSGRTITFPGFLKAYVESVDEEAGGQSDDAES
RLPNLSEGQRVTATELDPDGHSTNPPARYTEASLIKALEDLGIGRPSTYASIIKTILDRG
YVYKRGSALVPSWVAFAVIGLLEAHFGRLVDYGFTAAMEDDLDEIAGGHEQRTDWLTSFY
FGGAHGAENSVAREGGLKKMVGENLEDIDAREINSIRLFDDAEGREIHVRVGRFGPYLER
MVPNPDSPDGEPVSQRANLPDDLPPDELTLEYAEKLFSTPQEGRVLGVDPASGNEIVARE
GRFGPYVTELLREPEPEPEPDITPIPVEEAPSAGGTATGGGTATVTKKAAKKAPAKKAAK
KAAGPKPRTASLLKSMELSTVTLEDALRLLSLPRVVGVDPATGEEITAQNGRYGPYLKKG
TDSRSLADEEQMFTVTLEEALKIYSEPKRRGRQAAATPPLRELGTDPVSGSPMVIKDGRF
GPYVTDGETNASLRKGDEVDTITDERASELLADRRARGPAKKTAKKTAAKKVPAKKTAAK
KTAAKKTTAKKAAAKKE
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgggacaacagcacgtcgaacggctcgtcgggcacgcgtcggctcgtgatc
gtcgagtccccgaccaaggcgaagaagatcgcgccctacctgggccgggactacgtcgtc
gaggcctccgtcgggcacatccgtgacctgccgcgcggtgccgccgacgtgccggccaag
tacaagggcgagtcgtgggcccggctcggcgtgaacgtcgaccacggcttcgagccgctg
tacgtcgtcagtcccgagaagaagtccaaggtcaccgaactgaaggggctgctgaaggac
gcggacgagctgtacctcgcgaccgaccccgaccgtgagggcgaggccatcgcctggcac
ctgctcgagaccctcaagccgaaggtcccggtccgccggatggtgttccacgagatcacc
gagccggccatccgggccgccgcggaacacacccgcgacctcgacaacaacctcgtcgac
gcccaggagacccgccgcatcctcgaccgcctctacggctacgaggtcagcccggtgctg
tggaagaaggtcatgccgcggttgtcggcgggccgcgtgcagtccgtcgccactcgggtc
atcgtgcagcgcgaacgcgagcgcatggccttccggtccgcgacgtactgggacatcgcc
gccacgctcgacgccggcgccgacgcgagcccccgctcgttcggggcccggctcgtcggt
gtcgacggcgcccgcgtcgcggccggccgcgacttcggacccgacgggcagctcaagtcc
accggcgtcgtcgtgctcgacgaggcgtacgcgcgacggctcgccgaggccctgcacggt
gtcgacctgacggtgacgtcggtcgagagcaagccgtacacccgcaagccgtacgcgccg
ttcatgacgtcgaccctgcagcaggaggcgggccgcaagctgcggttctcgtcagagcgc
acgatgcgcatcgcgcagcgcctgtacgagaacggctacatcacgtacatgcgtaccgac
tcgacgaccctgtccgagagcgcgatctccgccgcccgggcgcaggccaccgagttgtac
ggcgcgcagtacgtgcaccccaccccgcggcagttcacccgcaaggtgaagaacgcgcag
gaggcgcacgaggcgatccgtccggccggcgacgtgttcgccacgcccggcgagctgcac
tcacgcctcgacaccgacgagtaccggctctacgagctcatctggcagcgcaccgtcgcc
tcccagatggccgacgcgcggggcaccaccctgacgctgcgcatcaccggcaccgccgcg
agcggcgaggagtgcacgttctcctcgtcgggccgcaccatcaccttcccgggcttcctc
aaggcgtacgtcgagagcgtcgacgaggaggccggcggccagtccgacgacgccgagtcc
cggctgcccaacctgtccgagggacagcgcgtcaccgcgaccgagctcgatccggacggc
cactcgaccaacccgccggcccgctacaccgaggccagcctgatcaaggcgctcgaggat
ctcggcatcggccggccgtcgacgtacgcgtcgatcatcaagaccatcctcgaccgcggc
tacgtctacaagcgtggcagcgccctggtcccgtcgtgggtggcgttcgcggtcatcggg
ctgctcgaggcgcacttcggacgcctcgtcgactacggcttcaccgccgccatggaggac
gacctcgacgagatcgcgggcggccacgagcagcgcaccgactggctgacgagcttctac
ttcggtggtgcccacggcgccgagaactcggtggcgcgcgagggcggcctgaagaagatg
gtcggagagaacctcgaggacatcgacgcccgcgagatcaactcgatccggctgttcgac
gacgccgagggccgggagatccacgtgcgcgtcggccggttcggcccctatctcgagcgg
atggtccccaatcccgactcccccgacggggaaccggtctcccagcgggcgaacctgccc
gacgacctgccgccggacgagctgacgctcgagtacgcggagaagctgttctcgaccccg
caggagggccgggtcctcggcgtcgacccggccagcggcaacgagatcgtcgcgcgggag
ggccgcttcggtccgtacgtgaccgagctgctgcgcgaaccggagccggagccggaaccg
gacatcacgcccatcccggtcgaggaggcaccctcggcgggcggcaccgcgactggtggt
ggcacggccaccgtgacgaagaaggccgcgaagaaggcgccggcgaagaaggccgccaag
aaggcggccggccccaagccgcgcacggcctcgctgctcaagtcgatggaactgtcgacg
gtgacgctcgaggacgccctgcggctgctgtcgctgccgcgggtggtcggggtcgacccc
gcgacgggcgaggagatcaccgcccagaacggccgctacgggccgtacctgaagaagggc
accgactcgcggtcgctggccgacgaggagcagatgttcaccgtcaccctcgaggaggcg
ctgaagatctactccgagcccaagcgccgcggtcggcaggccgccgccacgccgccgctg
cgggagctgggcaccgacccggtcagtggcagcccgatggtgatcaaggacgggcgcttc
ggcccgtacgtcacggacggcgagaccaacgccagcctccgcaagggcgacgaggtcgac
accatcaccgacgaacgcgcctccgagctgctcgcggatcgtcgcgcccggggcccggcg
aagaagaccgcgaagaagaccgcggccaagaaggttccggccaagaagacggccgccaag
aagaccgcggcaaagaagacgaccgcgaagaaggccgccgcgaagaaggagtga
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