Rhodococcus sp. 11-3: KZJ41_06620
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Entry
KZJ41_06620 CDS
T10209
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou03420
Nucleotide excision repair
Brite
Enzymes [BR:
rhou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZJ41_06620
Transcription machinery [BR:
rhou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KZJ41_06620
DNA repair and recombination proteins [BR:
rhou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KZJ41_06620
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
USC16563
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Position
complement(1423307..1424965)
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AA seq
552 aa
AA seq
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MADGPLIVQSDKTLLLEVDHALANEARQAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVTHSRFAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVM
RNKKIAPMLGARLDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHAINLDFETN
PWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWK
RELIARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRKSKGEYRNLELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APAECVEVRVTLTDAERMTYAVAEPEERYKLCSTAHTKIAVVKSILDRHRDSPTLIIGAY
LDQLDELGEALDAPVIKGSTRNKEREELFDRFRAGELKVLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPTIG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacggaccgttgatcgtccagtccgacaagaccctgctcctcgaggtcgaccac
gccctcgcgaacgaggcccggcaggccatcgcgccgttcgccgagctcgaacgcgccccc
gagcacgtgcacacctaccgggtcaccccgctggcgttgtggaacgcccgcgccgcggga
cacgacgccgagcaggtcgtcgacgccctggtcacccactcccggttcgcggtcccgcag
ccgctgctcgtcgacatcgtcgacaccatggcccgctacggccggctgcagctggtgaag
aaccccgcgcacggcctgaccctggtcagcctcgaccgggcggtgctcgaggaggtgatg
cgcaacaagaagatcgcgccgatgctcggcgcccggctcgacgacgacaccgtgatcgtg
catccgagcgagcgcggccggctcaagcagatgttgctcaaggtcggctggccggccgag
gacctcgccggctacgtcgacggtgaggcacacgcgatcaacctcgacttcgagaccaac
ccctggcacctgcgggactaccaggagatggccgcggactcgttctgggccggcggctcc
ggcgtggtggtgctgccgtgcggggcggggaagacgatggtgggtgcggccgcgatggcc
aaggcgggcgccaccaccctgatcctggtgaccaacaccgtcgcgggccggcagtggaag
cgcgagctgatcgcccgcacgtcgctcaccgaggacgagatcggcgagtactccggggag
aagaaggagatccgcccggtcaccatcgccacctaccaggtcatcacccgcaagtcgaag
ggcgagtaccgcaacctcgagctgttcgactcccgcgactgggggctgatgatctacgac
gaggtgcatctgctgcccgccccggtgttccggatgacagccgacctgcagtcccggcgc
cggctcggcctcaccgcgaccctcgtgcgcgaggacggccgcgagggcgacgtattctcg
ctcatcggccccaagcgctacgacgcaccgtggaaggacatcgaggcgcagggctggatc
gcgcccgcggagtgcgtcgaggtgcgggtgaccctgaccgacgcggaacggatgacgtac
gcggtggccgagcccgaggagcggtacaagctgtgctcgaccgcgcacacgaagatcgcg
gtggtgaagtcgatcctggaccggcaccgcgactcccccaccctgatcatcggggcgtac
ctcgatcagctcgacgagctcggcgaggcgctggacgccccggtgatcaagggctcgacc
cggaacaaggagcgcgaggagctgttcgaccgcttccgcgccggtgagctgaaggtgctc
gtcgtgtcgaaggtcgcgaacttctcgatcgacctgcccgaggcgtcggtggcggtgcag
gtgtcgggcacgttcggctcgcgccaggaggaggcgcagcgcctcggccggttgctgcgc
cccaagcacgacggcgggcaggcgcacttctactcggtcgtcgcgcgcgacaccctcgac
gccgagtacgccgcgcaccggcagcggttcctcgccgagcagggttacgcgtaccggatc
accgacgcggacgatctgctcggccccaccatcggctga
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