Rhodococcus sp. 11-3: KZJ41_08425
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Entry
KZJ41_08425 CDS
T10209
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_08425
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KZJ41_08425
Archaeal homologous recombinant proteins
KZJ41_08425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Methyltransf_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
USC16877
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Position
1789271..1790446
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AA seq
391 aa
AA seq
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MRILHTSDWHIGRTFHGVDLLSDQAQALAALADLVAERRVDVVVVAGDVYDRSIPSADAV
AVCNAGLEAIRRAGAVIVATSGNHDSPVRLGAAAAFAAEGGLHLITRVSQVDRPVLLDDA
HGTVAFYGIPYLEPEITRAELGVPEARSHAEILGAAMDRVRADARARGVRAVVLAHAFVV
GAEAAGSERSISVGGVETVPASAFDGVDYVALGHLHSPQTVAEHIRYSGSPLPYSFGERT
HRKAVWLVDLDATGRAAVERVDLPVVRGLSRLTGVLDDLLTDVAHTGAEDHYVSAVLTDA
VRPLDAMRRLQSRFPRALHVEWEPPVAASTVTYRQKVRGRSDLDVTRGFLADVRSEPSER
ELRWVQQALRDVDRAAGVGTEQTVAPGEASA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctcggactggcacatcggccgcaccttccacggcgtggacctg
ttgtccgaccaggcgcaggccctcgctgccctcgccgacctcgtcgccgagcggcgcgtc
gacgtggtggtggtggccggcgacgtctacgaccggtccatcccgagcgcggatgccgtc
gcggtgtgcaacgcgggactcgaggcgatccgccgggccggcgccgtcatcgtcgcgacg
tccggcaaccacgactcgcccgtccgtctcggcgccgccgcggcattcgccgccgagggc
gggctgcacctgatcacccgggtctcccaggtcgaccggcccgtcctgctcgacgacgcc
cacggcaccgtcgccttctacggcatcccctatctggagccggagatcacccgcgccgaa
ctgggggtgcccgaggcccgctcgcacgcggagatcctcggggcggcgatggaccgggtc
cgcgccgacgcgcgcgcccgcggcgttcgcgcagtggtgctcgcccacgccttcgtcgtc
ggcgccgaggccgccggctccgaacggtcgatctcggtcggcggcgtcgaaaccgtcccg
gcgtcggcgttcgacggcgtcgactacgtcgcgctcggtcacctccactccccacagacc
gtcgccgagcacatccgctactcgggctcgccgctgccgtactcgttcggcgaacgcacc
caccgcaaggccgtgtggctcgtcgatctggacgccaccgggcgggcggccgtcgagcgc
gtcgacctgccggtcgtgcggggcctgagccgtctcaccggcgtcctcgacgacctgctc
accgacgtcgcgcacaccggggcggaagaccactacgtctcggccgtcctcaccgacgcc
gtgcgccccctcgacgcgatgcgtcggctgcagtcccgtttcccccgtgccctccacgtc
gagtgggaaccgcccgtcgcggcatcgaccgtcacctaccggcagaaggtgcgcggccga
agcgacctcgacgtcacccgcggattcctggccgatgtgcgatcggagccgtccgagcgg
gagctgcgctgggtgcagcaggcgctgcgcgacgtcgaccgtgccgcgggcgtcgggacc
gagcagaccgtcgcaccgggggaggcgtccgcgtga
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