Rhodococcus sp. 11-3: KZJ41_08515
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Entry
KZJ41_08515 CDS
T10209
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KZJ41_08515 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_08515 (recC)
Enzymes [BR:
rhou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KZJ41_08515 (recC)
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KZJ41_08515 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
MtrG
Motif
Other DBs
NCBI-ProteinID:
USC16893
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All DBs
Position
1808117..1811413
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AA seq
1098 aa
AA seq
DB search
MLTLHRAERADTLAAALADLLAVPLADPFARELVAVPAKGVERWLTQRLSTVLGGTCGDG
VAANIDHPSPARLVDEALAAATGRAAEDDPWHPDRMLWTLLDVVDDCLDESWCTVLARHL
GRDGVDHRAGRRYATAAHLAGLFRSYSTQRPEMLVDWAAGRDTDGTGHGLADHLGWQARL
WRRLRERIGDDSPAERLTAACARLRAEPALVDWPSRLSLFGPTRLTVAQCAVLSAIAANR
DVHLWIPHPSPAMWEGQAAAEPVRRRADDRSALAVQHPLLASLARDVRELRAHLAGPGVA
DVHHTGRPGPDTLLGRLQDDLRADRPPARSAVADGTIRIHACHGPARQVEVLRECLLHLF
ADDPGLEPRDVVVMCPDVETYAPLVQAAFGQGALAQRDASGHPGHRLRVRLADRGLRRTN
PVLAVVSTLVDLADARVTASEVLDLAAAAPVRRRFGLVDDDLERLQEWTAAAGARWGIGK
GQRNAFGLGDFPQNTFGTALDRILLGAAADESQSEWLGLTLPLDDVESNDIDLTGRFAEY
IDRLTVALHGLRGPQPAAQWAAALARALDLLTDVEPADAWQLAQAHRELAAAVEHAGPAP
LRLADVRAMLAARLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLGLDDEVFPRAAHI
DGDDVLALNPCLGERDPRSEDRQLLLDAVMSAGETLLLFYTGADPVTGARRPPAIPLSEL
RDVVETMVGPEGMAEVVTRHPLQPFDPRNFRPGRPLSFDRAALAGARAAQHPARHRPGLL
HRPLAPVARTDVDLADLVAFVTHPTQAFLRQRLGVRVPDRDEDIADALDIGLDPLARWDL
GDRMLEALLAGTDPADFRAAEWRRGTLPPYRLGELALDDVAGTVDALVAVCRPIYTGPAD
TVDVNVDLGDGRRLTGTVGGVHGTVVARSTFSRLAPKHRLTAWVHLLAVAASDRPGQWQA
ITTGRGRFRSTPAWRSTINAPADALEQLARLVDLRDRGLHEPLPTATAAAAEYAERRHRG
DSVEMGVDAAAQEFGSTYGERTDRHIAYLYGSGVTLRDLTAVAARDDEQAWHGEPTRFGA
LARRLWEPLLSNEIQGRP
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacgctgcaccgcgccgagcgcgccgacaccctggcggccgccctcgccgacctg
ctcgccgtgcccctcgccgacccgttcgcccgcgagctcgtcgccgtccccgccaagggg
gtcgagcggtggctgacccagcggctgtcgacggtgctcgggggcacctgcggcgacggc
gtcgccgccaacatcgaccacccgtcgccggcacggttggtggacgaggcactggccgcc
gccaccggccgggctgcggaggacgacccgtggcatcccgaccggatgctgtggacgctg
ctcgacgtcgtcgacgactgcctcgacgaatcgtggtgcaccgtcctcgcccggcatctc
ggccgcgacggcgtcgatcaccgcgccggccgtcgctacgccaccgccgcccacctggcc
ggcctgttccgcagctactccacgcagcgcccggagatgctcgtcgactgggccgccgga
cgcgacacggacggcaccggccacggcctcgccgaccacctcgggtggcaggcacggctg
tggcggcggctgcgcgagcgcatcggcgacgacagtcccgccgagcggctcaccgccgcc
tgcgcgcggttgcgcgccgagcccgcgctcgtggactggccgtcgcggctgtcgctgttc
ggacccacccggctcaccgtcgcccagtgcgccgtgctgtccgcgatcgccgcgaaccgc
gatgtgcacctgtggattccgcaccccagcccggccatgtgggaggggcaggcggccgcg
gagccggtgcgccggcgcgccgacgaccgcagcgccctcgcggtgcaacaccccctcctg
gcgagcctggcccgtgacgtgcgcgaactgcgcgcgcacctggccggccccggagtcgcc
gacgtgcaccacaccggccggcccggccccgacaccctcctcggccggctgcaggacgac
ctccgcgccgaccggcccccggcccgctccgcggtcgccgacggcacgatccgcatccac
gcctgtcacggcccggcccggcaggtcgaggtgctgcgcgagtgcctgctgcacctgttc
gcggacgatccgggtctcgaaccgcgcgacgtggtcgtcatgtgcccggacgtggagacc
tacgcgccgctcgtgcaggccgccttcggtcagggcgccctcgcccagcgcgacgcttcc
ggacaccccgggcaccggttgcgggtgcgtctggccgatcggggcctgcgccgcaccaac
ccggtgctggcggtcgtgtcgacgctcgtggacctcgccgacgcgcgggtgaccgccagc
gaggtcctcgacctcgccgccgccgcgccggtgcgccggcggttcggcctcgtcgacgac
gacctcgaacggctgcaggagtggaccgccgccgccggcgcccgatggggcatcggcaag
ggacagcgaaacgccttcgggctcggggacttcccgcagaacaccttcggcacggcactg
gaccggatcctgctcggtgcggccgccgacgagtcgcagagcgagtggctcgggctcacc
ctcccgctcgacgacgtcgagagcaacgacatcgacctgaccggacggttcgccgagtac
atcgaccggctgacggtggcgctgcacggcctgcgcggtccgcaaccggccgcgcagtgg
gccgccgccctcgcccgcgcactggacctgctgaccgacgtcgagcccgccgacgcctgg
cagctcgcccaggcgcaccgcgaactcgcggccgccgtcgagcacgccgggccggcgccg
ctgcggctcgccgacgtgcgggccatgctggcggcccggctcgcggggcggccgacgcgc
gcgaacttccgcaccggtgaactgaccgtgtgcacgatggtgccgatgcggtcggtgccg
caccgggtcgtggtcctgctcggcctcgacgacgaggtcttcccccgcgccgcgcacatc
gacggtgacgacgtgctggcattgaacccctgtctgggagaacgtgatccgcgcagcgag
gaccggcagttgctgctcgacgccgtcatgtcggcgggggagacgctactgctgttctac
accggtgcggacccggtcaccggcgcccgccggcccccggcgatcccgctcagcgagctg
cgcgacgtggtcgagacgatggtcggacccgagggcatggccgaggtcgtcacccggcat
ccgctgcagccgttcgatccgcgcaacttccggcccggccgcccgctgagcttcgaccgg
gccgcactcgccggggcgcgcgccgcgcagcatccggcgaggcaccggcccgggctgctg
caccgtccgctcgcgcccgtcgcgcgcaccgacgtcgacctcgccgacctcgtcgcgttc
gtcacccaccccacccaggcgttcctgcggcagcggctcggggtgcgggtgcccgaccgg
gacgaggacatcgcggacgccctcgacatcgggctcgacccgctcgcccggtgggacctc
ggcgaccgcatgctcgaggcgctgctcgccggcacggaccccgcggacttccgggccgcc
gaatggcggcgcgggacactgccgccgtaccggctcggcgagctcgcgctcgacgacgtc
gccggcaccgtggacgccctggtggcggtgtgccggccgatctacacgggaccggccgac
accgtcgacgtgaacgtcgacctcggcgacggccggcggctgaccggcacggtcggcggg
gtccacggcaccgtcgtcgcccgcagcaccttctcccggctggcgccgaagcaccgcctc
accgcctgggtgcacctgctcgccgtcgccgcgtcggaccggccggggcagtggcaggcg
atcaccaccggccgcggccggttccgcagcaccccggcctggcggtccacgatcaacgcc
cccgccgacgcgctcgagcagctcgcccggctcgtggacctgcgcgaccgcgggctgcac
gagccgctgccgacggccaccgccgccgccgccgagtacgccgagcggcgacaccgcggc
gactccgtcgagatgggcgtcgacgccgccgcccaggagttcggctccacctacggcgaa
cgcaccgaccggcacatcgcctacctgtacggctccggcgtgacgctgcgggacctgacc
gccgtcgccgcccgcgacgacgagcaggcgtggcacggcgagcccacccggttcggcgcc
ctcgcgcggcgcctgtgggagccgttgctgtccaacgagatccaggggcgtccgtga
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